Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORD115-43-201ENST00000365503 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-36-201ENST00000365629 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORA27-201ENST00000384323 126 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 MIR136-201ENST00000385207 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 RNY4P18-201ENST00000391107 89 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 U8.17-201ENST00000391292 132 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 AL096840.1-201ENST00000603287 93 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-40-201ENST00000606510 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 MIR424-201ENST00000362227 98 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 Y_RNA.366-201ENST00000365540 102 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 RNY1P6-201ENST00000384193 109 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 Y_RNA.528-201ENST00000384575 108 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 MIR504-201ENST00000385065 83 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 MIR1263-201ENST00000408324 86 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 RPL23AP42-201ENST00000471152 471 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 COX6CP6-201ENST00000490840 228 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 RNU6-240P-201ENST00000516098 97 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
VAMP4O75379 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.28□□□□□ -2.04
VAMP4O75379 SNORD48-201ENST00000364953 64 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 SNORA1.2-201ENST00000365189 134 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 MIR764-201ENST00000390811 85 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 MIR1267-201ENST00000408723 78 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.28□□□□□ -2.04
VAMP4O75379 RNU7-96P-201ENST00000459535 64 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 SNORA31.17-201ENST00000516953 127 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 MIR4299-201ENST00000577899 72 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 AL121890.5-201ENST00000620848 304 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 AC091932.4-201ENST00000623386 200 ntBASIC2.28□□□□□ -2.04
VAMP4O75379 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.05
VAMP4O75379 ICE2P2-201ENST00000483823 2787 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 Y_RNA.241-201ENST00000364470 117 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 SNORD116-21-201ENST00000384507 92 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 AC093850.1-201ENST00000454121 251 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 Y_RNA.649-201ENST00000459077 103 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 RNU6-250P-201ENST00000516958 103 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VAMP4O75379 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.27□□□□□ -2.05
VAMP4O75379 SNORD3E-202ENST00000627253 216 ntBASIC2.27□□□□□ -2.05
VAMP4O75379 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VAMP4O75379 RNU6-755P-201ENST00000364400 103 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 RNU6-690P-201ENST00000365242 106 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 Y_RNA.494-201ENST00000384432 111 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 AC063976.4-201ENST00000421971 163 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 AC107297.1-201ENST00000459991 176 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 RNU6-998P-201ENST00000515894 101 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 AC084768.2-201ENST00000622736 221 ntBASIC2.26□□□□□ -2.05
VAMP4O75379 RPS29P24-201ENST00000486345 171 ntBASIC2.25□□□□□ -2.05
VAMP4O75379 PDCD5P2-201ENST00000507570 312 ntBASIC2.25□□□□□ -2.05
VAMP4O75379 RNU7-181P-201ENST00000517234 74 ntBASIC2.25□□□□□ -2.05
VAMP4O75379 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
VAMP4O75379 MIR8081-201ENST00000611533 95 ntBASIC2.25□□□□□ -2.05
VAMP4O75379 RNU6-1123P-201ENST00000362347 106 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 Y_RNA.198-201ENST00000364013 98 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 Y_RNA.370-201ENST00000365589 108 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 MIR516B2-201ENST00000385190 85 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 AL591806.2-201ENST00000433122 173 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.24□□□□□ -2.05
VAMP4O75379 AC090821.2-201ENST00000523552 176 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 MIR4255-201ENST00000579351 72 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.24□□□□□ -2.05
VAMP4O75379 AL596211.1-201ENST00000569873 2277 ntBASIC2.24□□□□□ -2.05
VAMP4O75379 RNU6-153P-201ENST00000364422 104 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 RNU6-880P-201ENST00000384526 107 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 MIR194-1-201ENST00000384892 85 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 MIR526A1-201ENST00000384897 85 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 MIR570-201ENST00000384917 97 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 MIR548A1-201ENST00000385041 97 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 AL035398.1-201ENST00000430869 322 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.23□□□□□ -2.05
VAMP4O75379 RN7SL274P-201ENST00000492268 272 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 RNU2-13P-201ENST00000515909 113 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 AL773524.1-201ENST00000614065 229 ntBASIC2.23□□□□□ -2.05
VAMP4O75379 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
VAMP4O75379 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
VAMP4O75379 Y_RNA.35-201ENST00000362601 101 ntBASIC2.22□□□□□ -2.05
VAMP4O75379 SNORA24-201ENST00000384096 131 ntBASIC2.22□□□□□ -2.05
VAMP4O75379 HMGN2P23-201ENST00000456759 269 ntBASIC2.22□□□□□ -2.05
VAMP4O75379 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.22□□□□□ -2.05
VAMP4O75379 AC021443.1-201ENST00000604478 211 ntBASIC2.22□□□□□ -2.05
VAMP4O75379 Y_RNA.298-201ENST00000364960 107 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 SNORA22-201ENST00000383907 134 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 SNORA70.7-201ENST00000384159 133 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 SNORD123-201ENST00000459473 70 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 SNORA31.4-201ENST00000516049 129 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 RNY4P20-201ENST00000516678 93 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 MIR548AR-201ENST00000582191 57 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 MIR4305-201ENST00000583252 102 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
VAMP4O75379 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VAMP4O75379 MIR302B-201ENST00000362188 73 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms