Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 MAPK10-266ENST00000641066 6555 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 MIRLET7C-201ENST00000362160 84 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 Y_RNA.351-201ENST00000365436 96 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 Y_RNA.467-201ENST00000384297 102 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 SNORA67.3-201ENST00000384366 140 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 U8.16-201ENST00000391279 133 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 AC139453.2-201ENST00000487255 133 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 AC108210.2-201ENST00000503681 201 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 DEFB122-202ENST00000569013 197 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 MIR3683-201ENST00000580847 82 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 AC067747.1-201ENST00000608026 250 ntBASIC2.97□□□□□ -1.93
PTCD1O75127 Y_RNA.155-201ENST00000363632 101 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 SNORA25.6-201ENST00000364121 118 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 RNU6-60P-201ENST00000364792 103 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 RNU6-679P-201ENST00000391003 106 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 RNA5SP270-201ENST00000411361 118 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCD1O75127 AC087499.4-201ENST00000448505 178 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 RNU7-12P-201ENST00000516030 62 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 MIR5007-201ENST00000583098 95 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCD1O75127 AC027279.3-201ENST00000625055 122 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 MIR203B-201ENST00000636080 86 ntBASIC2.96□□□□□ -1.94
PTCD1O75127 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PTCD1O75127 RNU6-363P-201ENST00000362895 105 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 SNORD115-19-201ENST00000363098 82 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 SNORD115-18-201ENST00000363293 82 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 RNA5SP99-201ENST00000364020 114 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 SNORD115-17-201ENST00000364612 82 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 MIR520A-201ENST00000384862 85 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 RNU6-733P-201ENST00000410759 104 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 SNX2P2-201ENST00000424553 323 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 MIR1270-201ENST00000459320 83 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 RNU7-34P-201ENST00000459394 64 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 RPS23P4-201ENST00000487908 423 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 RNA5SP168-201ENST00000516642 112 ntBASIC2.95□□□□□ -1.94
PTCD1O75127 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
PTCD1O75127 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTCD1O75127 MIR21-201ENST00000362134 72 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 MIR342-201ENST00000362212 99 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 RNU6-661P-201ENST00000362409 107 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 RNU4-67P-201ENST00000364569 141 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 Y_RNA.454-201ENST00000384224 113 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 RNU6-424P-201ENST00000384367 105 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 Y_RNA.494-201ENST00000384432 111 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 Y_RNA.507-201ENST00000384500 99 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 SNORA48.1-201ENST00000390879 135 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 RNA5SP144-201ENST00000410846 116 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 RNA5SP501-201ENST00000410990 112 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 AC004812.1-201ENST00000540773 146 ntBASIC2.94□□□□□ -1.94
PTCD1O75127 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
PTCD1O75127 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCD1O75127 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.93□□□□□ -1.94
PTCD1O75127 MIR221-201ENST00000385135 110 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 AL023284.1-201ENST00000403956 276 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 Y_RNA.620-201ENST00000411009 88 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 AC015922.2-201ENST00000435593 184 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 RPL23AP63-201ENST00000498752 471 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 RNU6-1258P-201ENST00000516911 111 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 MIR4506-201ENST00000584693 77 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 SNORD14A-201ENST00000606526 91 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.93□□□□□ -1.94
PTCD1O75127 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PTCD1O75127 Y_RNA.10-201ENST00000362371 110 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 Y_RNA.241-201ENST00000364470 117 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 RNU6-409P-201ENST00000384114 104 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 SNORD116-22-201ENST00000384430 92 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 RNU6-1031P-201ENST00000384773 107 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PTCD1O75127 MIR889-201ENST00000401280 79 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 SNORA7.5-201ENST00000410672 110 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 MRPL35P3-201ENST00000421557 364 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 AC006160.2-201ENST00000637708 154 ntBASIC2.92□□□□□ -1.94
PTCD1O75127 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PTCD1O75127 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PTCD1O75127 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PTCD1O75127 Y_RNA.191-201ENST00000363972 113 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 RNU6-24P-201ENST00000384440 107 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 RNU7-80P-201ENST00000459562 61 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 RNA5SP437-201ENST00000517249 129 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCD1O75127 MIR4668-201ENST00000582284 70 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 AC078899.2-201ENST00000595282 212 ntBASIC2.91□□□□□ -1.94
PTCD1O75127 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCD1O75127 Y_RNA.95-201ENST00000363079 95 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNU6-833P-201ENST00000363486 107 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 Y_RNA.171-201ENST00000363760 102 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNU6-776P-201ENST00000364403 104 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNU6-1022P-201ENST00000365049 104 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 POLR2J4-204ENST00000418424 324 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.9□□□□□ -1.95
PTCD1O75127 RNU7-45P-201ENST00000459460 63 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 SUB1P4-201ENST00000566062 339 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms