Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU1-58P-201ENST00000362413 163 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 RNU6-461P-201ENST00000364195 107 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 SNORA70.4-201ENST00000365509 134 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 MIR1236-201ENST00000408340 102 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 RNU6-602P-201ENST00000411155 105 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
ACTN4O43707 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 RNU7-137P-201ENST00000516788 62 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
ACTN4O43707 MIR8065-201ENST00000620577 100 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ACTN4O43707 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.29□□□□□ -1.88
ACTN4O43707 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ACTN4O43707 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
ACTN4O43707 RNU6-590P-201ENST00000365039 107 ntBASIC3.28□□□□□ -1.88
ACTN4O43707 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
ACTN4O43707 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
ACTN4O43707 SNORA25.13-201ENST00000516395 103 ntBASIC3.28□□□□□ -1.88
ACTN4O43707 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ACTN4O43707 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
ACTN4O43707 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
ACTN4O43707 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ACTN4O43707 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
ACTN4O43707 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ACTN4O43707 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
ACTN4O43707 RNU1-109P-201ENST00000383960 147 ntBASIC3.27□□□□□ -1.89
ACTN4O43707 SNORA2B-201ENST00000384583 137 ntBASIC3.27□□□□□ -1.89
ACTN4O43707 AC007179.3-201ENST00000604976 235 ntBASIC3.27□□□□□ -1.89
ACTN4O43707 AC108206.1-201ENST00000570186 4159 ntBASIC3.27□□□□□ -1.89
ACTN4O43707 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ACTN4O43707 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ACTN4O43707 MIR208A-201ENST00000362287 71 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 RNU6-525P-201ENST00000363685 104 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 MIR483-201ENST00000385070 76 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 MIR29C-201ENST00000385231 88 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 Z98742.3-201ENST00000418637 326 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
ACTN4O43707 AC004223.1-201ENST00000479840 271 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.26□□□□□ -1.89
ACTN4O43707 RPL12P50-201ENST00000603116 116 ntBASIC3.26□□□□□ -1.89
ACTN4O43707 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ACTN4O43707 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ACTN4O43707 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ACTN4O43707 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.26□□□□□ -1.89
ACTN4O43707 AC092435.3-201ENST00000565538 3654 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
ACTN4O43707 Y_RNA.57-201ENST00000362806 113 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 RNU6-478P-201ENST00000363904 110 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 SNORA71.1-201ENST00000364523 117 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 MIR526A1-201ENST00000384897 85 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 RPL23AP6-201ENST00000446637 472 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 AP001362.1-201ENST00000625165 124 ntBASIC3.25□□□□□ -1.89
ACTN4O43707 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
ACTN4O43707 RNU4-32P-201ENST00000363404 141 ntBASIC3.24□□□□□ -1.89
ACTN4O43707 Y_RNA.333-201ENST00000365274 102 ntBASIC3.24□□□□□ -1.89
ACTN4O43707 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
ACTN4O43707 Z97988.1-201ENST00000637697 135 ntBASIC3.24□□□□□ -1.89
ACTN4O43707 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.23□□□□□ -1.89
ACTN4O43707 SNORA9.2-201ENST00000365361 133 ntBASIC3.23□□□□□ -1.89
ACTN4O43707 BX510359.4-201ENST00000423750 193 ntBASIC3.23□□□□□ -1.89
ACTN4O43707 AC087499.7-201ENST00000441958 109 ntBASIC3.23□□□□□ -1.89
ACTN4O43707 AL450471.1-201ENST00000447509 127 ntBASIC3.23□□□□□ -1.89
ACTN4O43707 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.23□□□□□ -1.89
ACTN4O43707 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTN4O43707 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ACTN4O43707 SNORA38.1-201ENST00000364172 131 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 MIR512-1-201ENST00000384913 84 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
ACTN4O43707 RN7SKP132-201ENST00000516001 208 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 SCARNA16.3-201ENST00000516595 184 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 SNORA70.24-201ENST00000517233 118 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 AC022202.1-201ENST00000613515 211 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 AL449363.1-201ENST00000617815 186 ntBASIC3.22□□□□□ -1.89
ACTN4O43707 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ACTN4O43707 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ACTN4O43707 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.22□□□□□ -1.89
ACTN4O43707 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTN4O43707 RNU6-1237P-201ENST00000384777 107 ntBASIC3.21□□□□□ -1.9
ACTN4O43707 CYP3A52P-201ENST00000563326 91 ntBASIC3.21□□□□□ -1.9
ACTN4O43707 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ACTN4O43707 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACTN4O43707 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ACTN4O43707 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ACTN4O43707 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
ACTN4O43707 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
ACTN4O43707 RNU2-7P-201ENST00000410794 178 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 AC003982.1-202ENST00000469928 248 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 RN7SL499P-201ENST00000481141 276 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 SNORD14A-201ENST00000606526 91 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 AL513423.1-201ENST00000621695 132 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 Y_RNA.788-201ENST00000622394 112 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
ACTN4O43707 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.2□□□□□ -1.9
ACTN4O43707 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTN4O43707 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTN4O43707 RNU6-624P-201ENST00000363411 107 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 MIR597-201ENST00000384968 97 ntBASIC3.19□□□□□ -1.9
ACTN4O43707 MIR660-201ENST00000385235 97 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms