Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.69□□□□□ -2.14
SMAD6O43541 AC114811.1-201ENST00000507207 168 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 AL137067.1-201ENST00000615933 120 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 AC015726.2-201ENST00000620112 122 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 MIR4679-1-201ENST00000637619 75 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMAD6O43541 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SMAD6O43541 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 RNU6-240P-201ENST00000516098 97 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMAD6O43541 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 Y_RNA.440-201ENST00000384120 114 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 RNU6-163P-201ENST00000384396 106 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.67□□□□□ -2.14
SMAD6O43541 HMGN2P32-201ENST00000444648 269 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 RPS26P48-201ENST00000491713 339 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
SMAD6O43541 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SMAD6O43541 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNA5SP136-201ENST00000410906 107 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNA5SP170-201ENST00000517150 101 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 AP003484.1-201ENST00000530974 250 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNU6-349P-201ENST00000362402 107 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 Y_RNA.43-201ENST00000362670 111 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNU6-1255P-201ENST00000363434 112 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 Y_RNA.140-201ENST00000363474 103 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNU6-690P-201ENST00000365242 106 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 U8.16-201ENST00000391279 133 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNA5SP89-201ENST00000410300 108 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.65□□□□□ -2.15
SMAD6O43541 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.65□□□□□ -2.15
SMAD6O43541 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
SMAD6O43541 SNORA63D-201ENST00000364359 132 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 SNORD38C-201ENST00000384381 69 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 MIR570-201ENST00000384917 97 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SMAD6O43541 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC087499.4-201ENST00000448505 178 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 COX6CP6-201ENST00000490840 228 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 RNU7-70P-201ENST00000516941 66 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC007012.1-201ENST00000567192 175 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 MIR4679-2-201ENST00000578358 77 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 uc_338.28-201ENST00000612082 187 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC027279.3-201ENST00000625055 122 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
SMAD6O43541 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SMAD6O43541 MIR450A1-201ENST00000362262 91 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNU1-133P-201ENST00000364867 167 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.351-201ENST00000365436 96 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.549-201ENST00000384657 102 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNA5SP501-201ENST00000410990 112 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNY4P20-201ENST00000516678 93 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 AL596211.1-201ENST00000569873 2277 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.116-201ENST00000363292 103 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 Y_RNA.281-201ENST00000364774 94 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNY1P6-201ENST00000384193 109 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-424P-201ENST00000384367 105 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 Y_RNA.494-201ENST00000384432 111 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SNORD12C-201ENST00000386307 89 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC015922.2-201ENST00000435593 184 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AL603825.1-201ENST00000438481 80 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SUB1P4-201ENST00000566062 339 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 HSPE1P19-201ENST00000603327 295 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC021443.1-201ENST00000604478 211 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC091932.4-201ENST00000623386 200 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AL442644.1-201ENST00000454390 3105 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMAD6O43541 MIR342-201ENST00000362212 99 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-661P-201ENST00000362409 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 Y_RNA.241-201ENST00000364470 117 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-106P-201ENST00000384405 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SMAD6O43541 U8.17-201ENST00000391292 132 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-168P-201ENST00000516189 101 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-830P-201ENST00000516353 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 AL035470.1-201ENST00000622571 220 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms