Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR4438-201ENST00000585271 93 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-834P-201ENST00000362367 110 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-839P-201ENST00000363347 108 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-626P-201ENST00000363354 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-682P-201ENST00000363843 106 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU4-75P-201ENST00000364621 146 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-429P-201ENST00000384582 108 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 MIR626-201ENST00000385032 94 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-816P-201ENST00000390914 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RPL30P16-201ENST00000419341 429 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.55□□□□□ -2.66
COL6A5A8TX70 AC026414.1-201ENST00000504046 698 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-341P-201ENST00000516973 96 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 AC079248.2-201ENST00000623779 326 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 AC091948.2-201ENST00000636510 279 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-530P-201ENST00000391180 107 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 AC090615.1-201ENST00000577519 154 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 AC005520.4-201ENST00000604337 90 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 FGF7P2-201ENST00000332473 296 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 MIR124-1-201ENST00000385275 85 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.56□□□□□ -2.66
COL6A5A8TX70 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.56□□□□□ -2.66
COL6A5A8TX70 MTND4P25-201ENST00000441039 533 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 SNORA31.3-201ENST00000516029 96 ntBASIC-1.56□□□□□ -2.66
COL6A5A8TX70 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 RNU6-309P-201ENST00000364573 106 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.57□□□□□ -2.66
COL6A5A8TX70 RNU6-221P-201ENST00000459541 99 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 AC022616.6-201ENST00000520479 119 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 U6atac.1-201ENST00000616025 117 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 MIR519E-201ENST00000385075 84 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
COL6A5A8TX70 MIR5006-201ENST00000583027 110 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 MIR548AC-201ENST00000585049 88 ntBASIC-1.57□□□□□ -2.66
COL6A5A8TX70 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-454P-201ENST00000364292 107 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 SNORD115-7-201ENST00000365306 82 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-359P-201ENST00000365466 108 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-378P-201ENST00000384324 107 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-376P-201ENST00000384731 106 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 BX295541.1-201ENST00000417774 250 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 CYCSP46-201ENST00000423569 204 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 EPS15P1-201ENST00000448836 336 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU7-181P-201ENST00000517234 74 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 MIR4762-201ENST00000585261 75 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-777P-201ENST00000364265 104 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 AC004866.1-201ENST00000411748 78 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-75P-201ENST00000515944 104 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.58□□□□□ -2.66
COL6A5A8TX70 AC009878.1-201ENST00000621819 340 ntBASIC-1.58□□□□□ -2.66
COL6A5A8TX70 RNU6-238P-201ENST00000363313 106 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 MIR520D-201ENST00000385002 87 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 RNU6-619P-201ENST00000365146 108 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 RNU6-214P-201ENST00000384130 107 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 RNU6-114P-201ENST00000384704 105 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 RNA5SP454-201ENST00000517231 127 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.59□□□□□ -2.66
COL6A5A8TX70 AL117187.1-201ENST00000555482 181 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 AC013734.1-201ENST00000619329 111 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 AL157770.1-201ENST00000623049 439 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 AC022418.1-201ENST00000624118 445 ntBASIC-1.59□□□□□ -2.66
COL6A5A8TX70 RNU6-560P-201ENST00000364007 108 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-668P-201ENST00000364180 107 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-384P-201ENST00000364900 104 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-395P-201ENST00000365662 106 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU7-182P-201ENST00000459009 62 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 MTCO2P6-201ENST00000463134 685 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RMST_10.1-201ENST00000616309 154 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 SNORD18C-201ENST00000362704 69 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-102P-201ENST00000384485 104 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 SNORD12C-201ENST00000386307 89 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 MIR548Q-201ENST00000408404 100 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU2-14P-201ENST00000411053 191 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AL365203.2-201ENST00000423444 196 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 RNU6-998P-201ENST00000515894 101 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 U7.5-201ENST00000517224 61 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.6□□□□□ -2.67
COL6A5A8TX70 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.6□□□□□ -2.67
COL6A5A8TX70 MIR548H5-201ENST00000580314 60 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AP001836.1-201ENST00000604675 523 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 AC231657.1-201ENST00000624313 397 ntBASIC-1.6□□□□□ -2.67
COL6A5A8TX70 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
COL6A5A8TX70 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms