Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU6-947P-201ENST00000516264 106 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 MIR3646-201ENST00000578301 84 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.04□□□□□ -2.24
SRRM4A7MD48 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
SRRM4A7MD48 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNY1P11-201ENST00000363759 113 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 Y_RNA.215-201ENST00000364204 112 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 SNORA25.7-201ENST00000364375 127 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 Y_RNA.488-201ENST00000384403 102 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 Y_RNA.547-201ENST00000384654 119 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 SNORA75.5-201ENST00000391291 81 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC108667.1-201ENST00000428618 249 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC245047.7-201ENST00000440265 293 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC004223.1-201ENST00000479840 271 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 SNORA25.12-201ENST00000516202 82 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC112693.2-201ENST00000556538 232 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.03□□□□□ -2.24
SRRM4A7MD48 MIR3129-201ENST00000581095 76 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AL365205.2-201ENST00000594586 68 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 AC015726.2-201ENST00000620112 122 ntBASIC1.03□□□□□ -2.24
SRRM4A7MD48 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR526A1-201ENST00000384897 85 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR516B2-201ENST00000385190 85 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR569-201ENST00000385228 96 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR513C-201ENST00000401352 84 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.02□□□□□ -2.25
SRRM4A7MD48 AF228730.3-201ENST00000436691 102 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 SNORA31.2-201ENST00000516019 134 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 RNA5SP272-201ENST00000516095 111 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 SNORD111.1-201ENST00000516421 86 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 RNU6-426P-201ENST00000516464 97 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 RNU7-43P-201ENST00000516554 64 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 SNORA74.3-201ENST00000517108 154 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 AC090142.3-201ENST00000519012 385 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR4498-201ENST00000577599 66 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 MIR548X2-201ENST00000579776 100 ntBASIC1.02□□□□□ -2.25
SRRM4A7MD48 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.02□□□□□ -2.25
SRRM4A7MD48 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
SRRM4A7MD48 SNORD115-28-201ENST00000363931 81 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 RNU6-1067P-201ENST00000384752 107 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 RNU4-61P-201ENST00000411243 107 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 RNU7-197P-201ENST00000458836 62 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.01□□□□□ -2.25
SRRM4A7MD48 MIR4421-201ENST00000578133 69 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 MIR3660-201ENST00000584845 100 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 snoU13.31-201ENST00000607291 104 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 AL512598.1-201ENST00000610158 273 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 MIR376A2-201ENST00000636782 80 ntBASIC1.01□□□□□ -2.25
SRRM4A7MD48 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.37-201ENST00000362606 108 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.251-201ENST00000364551 99 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.338-201ENST00000365320 114 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.343-201ENST00000365354 112 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.497-201ENST00000384447 98 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.542-201ENST00000384641 111 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 SNORA20-201ENST00000384662 132 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 SNORD77.3-201ENST00000391113 65 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 RNU6-460P-201ENST00000391158 108 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 RNA5SP127-201ENST00000411051 133 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 RNU7-95P-201ENST00000459222 64 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 AC108729.3-201ENST00000513484 108 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 RNU4-57P-201ENST00000515980 135 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 SNORA18.4-201ENST00000516440 124 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 AC090821.2-201ENST00000523552 176 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 AL442644.1-201ENST00000454390 3105 ntBASIC1□□□□□ -2.25
SRRM4A7MD48 Y_RNA.52-201ENST00000362760 96 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 RNA5SP48-201ENST00000363969 126 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 RNU6-704P-201ENST00000364162 103 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 Y_RNA.420-201ENST00000384043 110 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 Y_RNA.568-201ENST00000384742 113 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 MIR520C-201ENST00000385005 87 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 MIR624-201ENST00000385217 97 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 MIR613-201ENST00000385248 95 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 RNU6-938P-201ENST00000411285 103 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 AP1B1P2-201ENST00000416196 106 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 AL392103.1-201ENST00000447000 198 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 SNORD36C-201ENST00000516733 66 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 AC134878.1-201ENST00000619901 243 ntBASIC0.99□□□□□ -2.25
SRRM4A7MD48 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SRRM4A7MD48 SNORD50.2-201ENST00000365465 70 ntBASIC0.98□□□□□ -2.25
SRRM4A7MD48 RNU6-1292P-201ENST00000383856 107 ntBASIC0.98□□□□□ -2.25
SRRM4A7MD48 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
SRRM4A7MD48 RNU6-257P-201ENST00000410238 98 ntBASIC0.98□□□□□ -2.25
SRRM4A7MD48 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
SRRM4A7MD48 AL591704.2-201ENST00000421658 181 ntBASIC0.98□□□□□ -2.25
SRRM4A7MD48 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.98□□□□□ -2.25
SRRM4A7MD48 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms