Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.488-201ENST00000384403 102 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 Y_RNA.497-201ENST00000384447 98 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 SNORA40.5-201ENST00000391061 128 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 SNORD123-201ENST00000459473 70 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 RNU2-13P-201ENST00000515909 113 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 RNU6-1223P-201ENST00000517124 104 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 AP003484.1-201ENST00000530974 250 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 AC106754.2-201ENST00000623006 233 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 SNORD1A-201ENST00000364968 72 ntBASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 SNORD41-201ENST00000386967 70 ntBASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 SNORD36C-201ENST00000516733 66 ntBASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 MIR376A2-201ENST00000636782 80 ntBASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC85CA6NKD9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 MIR934-201ENST00000401241 83 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 MIR513C-201ENST00000401352 84 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 AL451046.2-201ENST00000403074 277 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 AC027119.1-201ENST00000440877 241 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 HSPE1P24-201ENST00000450782 238 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 RNU7-43P-201ENST00000516554 64 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.09□□□□□ -2.07
CCDC85CA6NKD9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.433-201ENST00000384089 102 ntBASIC2.08□□□□□ -2.08
CCDC85CA6NKD9 RNU6-346P-201ENST00000516288 111 ntBASIC2.08□□□□□ -2.08
CCDC85CA6NKD9 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
CCDC85CA6NKD9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.52-201ENST00000362760 96 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 RNU6-774P-201ENST00000363238 107 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 RNY1P11-201ENST00000363759 113 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 SNORA24-201ENST00000384096 131 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 RNU1-78P-201ENST00000391248 165 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 AC079140.2-201ENST00000506193 142 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 SNORA18.7-201ENST00000516910 131 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 RNU7-181P-201ENST00000517234 74 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 AP001340.1-201ENST00000624405 217 ntBASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC85CA6NKD9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 MIR96-201ENST00000362288 78 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.120-201ENST00000363304 110 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 RPS29P1-201ENST00000465274 159 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 RPS26P48-201ENST00000491713 339 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 RNA5SP236-201ENST00000516169 116 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 MIR4422-201ENST00000581938 83 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 MIR548AR-201ENST00000582191 57 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 AL357312.1-201ENST00000603879 298 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 MIR8063-201ENST00000621930 81 ntBASIC2.06□□□□□ -2.08
CCDC85CA6NKD9 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 RNY1P4-201ENST00000384595 115 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 SNX2P2-201ENST00000424553 323 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 RNU1-92P-201ENST00000517017 135 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 AL645939.4-201ENST00000604495 135 ntBASIC2.05□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 RNU6-187P-201ENST00000384139 106 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 SNORA27-201ENST00000384323 126 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 SNORA25.12-201ENST00000516202 82 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 RNU6-426P-201ENST00000516464 97 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 RNU2-60P-201ENST00000517290 128 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 AC090821.2-201ENST00000523552 176 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 SNORD53B-201ENST00000577887 78 ntBASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC85CA6NKD9 RNU6-704P-201ENST00000364162 103 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 MIR520E-201ENST00000384867 87 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 SNORD28B-201ENST00000390993 75 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RNU7-96P-201ENST00000459535 64 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 AC107297.1-201ENST00000459991 176 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RNU6-922P-201ENST00000516753 99 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 MIR4764-201ENST00000580680 88 ntBASIC2.03□□□□□ -2.08
CCDC85CA6NKD9 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
CCDC85CA6NKD9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.02□□□□□ -2.09
CCDC85CA6NKD9 AL603914.1-201ENST00000401964 204 ntBASIC2.02□□□□□ -2.09
CCDC85CA6NKD9 RPL30P7-201ENST00000479312 323 ntBASIC2.02□□□□□ -2.09
CCDC85CA6NKD9 RPS29P24-201ENST00000486345 171 ntBASIC2.02□□□□□ -2.09
CCDC85CA6NKD9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 AC010332.2-201ENST00000613083 1904 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 MTND5P32-201ENST00000560711 1802 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms