Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TSC22D4Q9Y3Q8 AC245060.5-201ENST00000610778 3293 ntBASIC2.27□□□□□ -2.05
TSC22D4Q9Y3Q8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 U8.5-201ENST00000364528 136 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR1255A-201ENST00000408338 113 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.601-201ENST00000410500 113 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 AC099677.2-201ENST00000436385 175 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU7-80P-201ENST00000459562 61 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 AC018868.1-201ENST00000491307 315 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 SNORA31.4-201ENST00000516049 129 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR3618-201ENST00000580330 88 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 AL353149.1-201ENST00000610667 244 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 U7.3-201ENST00000616123 62 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 AC095038.3-201ENST00000634439 195 ntBASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.155-201ENST00000363632 101 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 RNY1P1-201ENST00000364372 112 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-497P-201ENST00000365316 104 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR605-201ENST00000385078 83 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR577-201ENST00000385196 96 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 RN7SKP200-201ENST00000410564 320 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AL512326.2-201ENST00000426359 151 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AL606517.2-201ENST00000442855 241 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 AC025521.1-201ENST00000621624 286 ntBASIC2.25□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-170P-201ENST00000362832 104 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.360-201ENST00000365512 102 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.507-201ENST00000384500 99 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 RPL39P39-201ENST00000455840 151 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU7-94P-201ENST00000459576 63 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 AC078899.2-201ENST00000595282 212 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 IGLL4P-201ENST00000614590 133 ntBASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TSC22D4Q9Y3Q8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-862P-201ENST00000362804 105 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-832P-201ENST00000363319 107 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.454-201ENST00000384224 113 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.494-201ENST00000384432 111 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 RNA5SP144-201ENST00000410846 116 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC004941.2-201ENST00000427009 228 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC087499.4-201ENST00000448505 178 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-1116P-201ENST00000517269 99 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC004812.1-201ENST00000540773 146 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR4778-201ENST00000577635 80 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 AC091304.10-201ENST00000641554 121 ntBASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TSC22D4Q9Y3Q8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 RNU6-733P-201ENST00000410759 104 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 BTF3P4-201ENST00000418852 495 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 AL353813.1-201ENST00000440700 253 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 RPS23P4-201ENST00000487908 423 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 RNA5SP395-201ENST00000516567 118 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR4694-201ENST00000578534 80 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TSC22D4Q9Y3Q8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
TSC22D4Q9Y3Q8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 Y_RNA.10-201ENST00000362371 110 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU6-661P-201ENST00000362409 107 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU6-363P-201ENST00000362895 105 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU6-1125P-201ENST00000363601 107 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 Y_RNA.190-201ENST00000363964 101 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 Y_RNA.241-201ENST00000364470 117 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU4-67P-201ENST00000364569 141 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 SNORA4.2-201ENST00000365313 147 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU6-409P-201ENST00000384114 104 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU6-813P-201ENST00000384691 107 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 AL627390.1-201ENST00000396055 340 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 SRIP3-201ENST00000413200 219 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 AC245047.3-201ENST00000429428 127 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RNU7-45P-201ENST00000459460 63 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 AC114811.1-201ENST00000507207 168 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 MIR3945-201ENST00000581853 98 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 MIR3202-2-201ENST00000635980 79 ntBASIC2.21□□□□□ -2.06
TSC22D4Q9Y3Q8 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms