Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 MIR548F5-201ENST00000408421 86 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 AC096531.1-201ENST00000419107 107 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 AC005357.1-201ENST00000588399 301 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 AC015540.1-201ENST00000615828 501 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 AP001282.2-201ENST00000616149 309 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 TPTEP1-208ENST00000636884 213 ntBASIC-0.56□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-403P-201ENST00000363163 104 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 MIR548I3-201ENST00000408378 149 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 PISRT1.1-201ENST00000616930 107 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 AL662814.1-201ENST00000617364 121 ntBASIC-0.57□□□□□ -2.5
HDGFL3Q9Y3E1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNY4P14-201ENST00000363656 96 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 U8.15-201ENST00000390947 134 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 SNORD77.3-201ENST00000391113 65 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNU2-16P-201ENST00000410712 136 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RPL39P25-201ENST00000449384 154 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNU7-149P-201ENST00000516739 59 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 MIR3666-201ENST00000607845 111 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 AC063944.3-201ENST00000609969 533 ntBASIC-0.58□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-535P-201ENST00000384722 107 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU2-14P-201ENST00000411053 191 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 AC096949.1-201ENST00000412047 152 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU7-96P-201ENST00000459535 64 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-506P-201ENST00000516553 94 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU7-4P-201ENST00000516961 62 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 AC144568.1-201ENST00000520139 137 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 MIR5706-201ENST00000579841 80 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 MIR4491-201ENST00000581087 68 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 AL670379.3-201ENST00000605040 251 ntBASIC-0.59□□□□□ -2.5
HDGFL3Q9Y3E1 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 SNORA72.4-201ENST00000384174 132 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 AC023449.1-201ENST00000454464 154 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 RNU2-11P-201ENST00000459191 187 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-998P-201ENST00000515894 101 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-314P-201ENST00000516574 104 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.6□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 SNORA26.6-201ENST00000391256 115 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AC107399.1-201ENST00000451226 265 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 SNORD36C-201ENST00000516733 66 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 RNU2-31P-201ENST00000516954 155 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 MTND5P34-201ENST00000568888 325 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AL021707.8-201ENST00000609428 183 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 U7.6-201ENST00000610841 64 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AC006157.1-201ENST00000611750 366 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AC122108.2-201ENST00000611946 526 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 MIR8064-201ENST00000612863 90 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AC010205.1-201ENST00000616668 449 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 MIR6717-201ENST00000622747 73 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 U6.92-201ENST00000636464 89 ntBASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.61□□□□□ -2.51
HDGFL3Q9Y3E1 AL596211.1-201ENST00000569873 2277 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-801P-201ENST00000364087 105 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-708P-201ENST00000384217 107 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 MIR181A1-201ENST00000385026 110 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 RNA5SP237-201ENST00000410414 113 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-475P-201ENST00000516073 104 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 MIR3925-201ENST00000584674 77 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 AC011921.3-201ENST00000605540 361 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 AL442067.1-201ENST00000613261 223 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.62□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 SNORD14C-201ENST00000365382 88 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 SNORA8.3-201ENST00000384679 139 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 MIR548A2-201ENST00000384956 97 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-510P-201ENST00000391239 108 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-120P-201ENST00000516077 103 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 RNU6-911P-201ENST00000516523 104 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 AP003072.1-201ENST00000531740 145 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 CR383656.4-201ENST00000546909 122 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 MIR3145-201ENST00000580727 82 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 AL133255.1-201ENST00000606374 441 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 AL162376.1-201ENST00000624117 175 ntBASIC-0.63□□□□□ -2.51
HDGFL3Q9Y3E1 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms