Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 SNORA70.12-201ENST00000516084 153 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU7-99P-201ENST00000516271 62 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 SNORA31.10-201ENST00000516482 106 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1234P-201ENST00000516877 103 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-971P-201ENST00000516920 106 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU7-172P-201ENST00000517125 64 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 AC006435.5-201ENST00000624486 112 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 SNORD50.2-201ENST00000365465 70 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 RNU6-643P-201ENST00000384018 107 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 SNORA22C-201ENST00000384614 134 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 RN7SKP200-201ENST00000410564 320 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 SNORD11-201ENST00000459124 84 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 RPL23AP91-201ENST00000569211 455 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 AC120024.3-201ENST00000603167 156 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 AL391903.3-201ENST00000612158 163 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 MIR8054-201ENST00000620877 86 ntBASIC1.28□□□□□ -2.2
CLIP2Q9UDT6 SNORD114-7-201ENST00000362520 77 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 RNU6-103P-201ENST00000363686 107 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 RNU6-959P-201ENST00000384671 107 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 RNU6-376P-201ENST00000384731 106 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 SNORA12.1-201ENST00000390873 148 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 PGBD4P5-201ENST00000445958 426 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 AC011604.1-201ENST00000545978 196 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 AL512310.8-201ENST00000550183 120 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 MIR548X2-201ENST00000579776 100 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 AC091178.2-201ENST00000584401 117 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 MTND1P7-201ENST00000632801 297 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 AC010332.2-201ENST00000613083 1904 ntBASIC1.27□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 RNU6-22P-201ENST00000384355 107 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 SNORD72-201ENST00000390994 80 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 SNRPGP10-201ENST00000432323 225 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 AC107027.2-201ENST00000512197 115 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 RNU2-60P-201ENST00000517290 128 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 AC112693.2-201ENST00000556538 232 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 MIR4452-201ENST00000583004 71 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.26□□□□□ -2.21
CLIP2Q9UDT6 RNU6-1290P-201ENST00000362957 109 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 RNU6-674P-201ENST00000363831 107 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 RNU6-978P-201ENST00000364371 103 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 RNU6-144P-201ENST00000383951 107 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 SNORA72-201ENST00000384339 132 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 RNU6-735P-201ENST00000410612 107 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC010154.1-201ENST00000425857 269 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC245047.3-201ENST00000429428 127 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC233266.1-201ENST00000454518 96 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC242852.1-201ENST00000612151 96 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC244015.1-201ENST00000622301 99 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 MIR376A2-201ENST00000636782 80 ntBASIC1.25□□□□□ -2.21
CLIP2Q9UDT6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 SNORA1B-201ENST00000362535 133 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU6-728P-201ENST00000365375 104 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNA5SP259-201ENST00000365541 109 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 MIR562-201ENST00000384894 95 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU6-440P-201ENST00000390882 105 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU7-107P-201ENST00000459121 61 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU6-1211P-201ENST00000459179 105 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 RNU7-149P-201ENST00000516739 59 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 MIR3664-201ENST00000579074 99 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 AL513423.1-201ENST00000621695 132 ntBASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.24□□□□□ -2.21
CLIP2Q9UDT6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms