Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU6-215P-201ENST00000365169 102 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 Y_RNA.346-201ENST00000365385 112 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD3E-202ENST00000627253 216 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
PPARGC1AQ9UBK2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-508P-201ENST00000363231 103 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA70B-201ENST00000384210 135 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RNU5E-3P-201ENST00000515913 68 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RNU1-41P-201ENST00000516161 162 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RNU1-48P-201ENST00000516400 162 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-1061P-201ENST00000516530 99 ntBASIC2.18□□□□□ -2.06
PPARGC1AQ9UBK2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNU1-133P-201ENST00000364867 167 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA27-201ENST00000384323 126 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-476P-201ENST00000384726 107 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 U8.17-201ENST00000391292 132 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-1064P-201ENST00000410626 104 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNA5SP136-201ENST00000410906 107 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 RNU7-96P-201ENST00000459535 64 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 MIR4648-201ENST00000580107 72 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 AL096840.1-201ENST00000603287 93 ntBASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PPARGC1AQ9UBK2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 Y_RNA.241-201ENST00000364470 117 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 RNY1P6-201ENST00000384193 109 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-1144P-201ENST00000384247 104 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 MIR1267-201ENST00000408723 78 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 AC107297.1-201ENST00000459991 176 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 MIR3945-201ENST00000581853 98 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 AC108081.1-201ENST00000604358 221 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 AL137067.1-201ENST00000615933 120 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PPARGC1AQ9UBK2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.351-201ENST00000365436 96 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 SNORA70.7-201ENST00000384159 133 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.525-201ENST00000384570 113 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNA5SP489-201ENST00000410986 109 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RPS29P24-201ENST00000486345 171 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-998P-201ENST00000515894 101 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-919P-201ENST00000516731 104 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 AC090821.2-201ENST00000523552 176 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 AL670379.3-201ENST00000605040 251 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 AC091932.4-201ENST00000623386 200 ntBASIC2.15□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-349P-201ENST00000362402 107 ntBASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.81-201ENST00000362997 102 ntBASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 AL035398.1-201ENST00000430869 322 ntBASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-781P-201ENST00000516377 101 ntBASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 AC025166.1-201ENST00000612411 163 ntBASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
PPARGC1AQ9UBK2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-661P-201ENST00000362409 107 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-1325P-201ENST00000364905 105 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 SNORD20-201ENST00000384550 80 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 MIR194-1-201ENST00000384892 85 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 AC093850.1-201ENST00000454121 251 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 COX6CP6-201ENST00000490840 228 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 IGKV3-31-201ENST00000523109 329 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 IGKV1-22-201ENST00000524313 326 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 AC022254.1-201ENST00000567857 235 ntBASIC2.13□□□□□ -2.07
PPARGC1AQ9UBK2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-690P-201ENST00000365242 106 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.370-201ENST00000365589 108 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-1067P-201ENST00000384752 107 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 MIR526A1-201ENST00000384897 85 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 MIR516B2-201ENST00000385190 85 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.630-201ENST00000411370 108 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 AC104984.5-201ENST00000586878 94 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-414P-201ENST00000363705 104 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.366-201ENST00000365540 102 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 SNORA24-201ENST00000384096 131 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 AL161935.2-201ENST00000414627 60 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 JTBP1-201ENST00000441314 247 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 RNU2-13P-201ENST00000515909 113 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 RNU6-240P-201ENST00000516098 97 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 RNU7-181P-201ENST00000517234 74 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms