Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 AL513423.1-201ENST00000621695 132 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
CNTN3Q9P232 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.72□□□□□ -1.97
CNTN3Q9P232 MIR2052-201ENST00000636055 55 ntBASIC2.72□□□□□ -1.97
CNTN3Q9P232 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CNTN3Q9P232 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTN3Q9P232 Y_RNA.531-201ENST00000384589 121 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU6-1319P-201ENST00000390855 104 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU6-747P-201ENST00000390928 104 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU6-241P-201ENST00000391148 104 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNA5SP261-201ENST00000410536 106 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU6-177P-201ENST00000411257 104 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU7-53P-201ENST00000516705 60 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU7-193P-201ENST00000516723 65 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 RNU6-158P-201ENST00000517104 100 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 SNORA31.25-201ENST00000517242 134 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 AC004812.1-201ENST00000540773 146 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
CNTN3Q9P232 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNTN3Q9P232 RNU6-112P-201ENST00000363599 104 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 RPL39P25-201ENST00000449384 154 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 RPS23P4-201ENST00000487908 423 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 RPL23AP63-201ENST00000498752 471 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 MIR4709-201ENST00000577272 72 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
CNTN3Q9P232 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNTN3Q9P232 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.7□□□□□ -1.98
CNTN3Q9P232 AC092881.1-201ENST00000638218 2733 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 RNU6-661P-201ENST00000362409 107 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 SNORA51.10-201ENST00000384418 136 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 MIR590-201ENST00000385008 97 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 RNU6-816P-201ENST00000390914 107 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 RNU6-1268P-201ENST00000391214 107 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 RNU6-1239P-201ENST00000391310 107 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 AL359511.1-201ENST00000402970 211 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 SNORD23.1-201ENST00000408212 104 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 SNORA31.4-201ENST00000516049 129 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 RNU6-904P-201ENST00000516206 101 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
CNTN3Q9P232 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CNTN3Q9P232 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CNTN3Q9P232 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CNTN3Q9P232 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
CNTN3Q9P232 Y_RNA.507-201ENST00000384500 99 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 RNU6-296P-201ENST00000384608 107 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 MIR516B2-201ENST00000385190 85 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 RNA5SP501-201ENST00000410990 112 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 POLR2J4-204ENST00000418424 324 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 AL512326.2-201ENST00000426359 151 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 snoU13.27-201ENST00000459278 104 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 RNU7-34P-201ENST00000459394 64 ntBASIC2.68□□□□□ -1.98
CNTN3Q9P232 RNA5SP126-201ENST00000365092 109 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 RNU6-1067P-201ENST00000384752 107 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 MIR660-201ENST00000385235 97 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 RPS29P29-201ENST00000456396 171 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 RNU7-67P-201ENST00000459003 62 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 RNU2-13P-201ENST00000515909 113 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 RNA5SP437-201ENST00000517249 129 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 AC021506.2-201ENST00000612354 169 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 AC087741.2-201ENST00000619415 172 ntBASIC2.67□□□□□ -1.98
CNTN3Q9P232 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CNTN3Q9P232 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORD115-2-201ENST00000362842 82 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORD115-19-201ENST00000363098 82 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORD115-18-201ENST00000363293 82 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 RNU4-36P-201ENST00000364294 144 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORD115-17-201ENST00000364612 82 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 RNU6-294P-201ENST00000364999 102 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORD115-20-201ENST00000365099 82 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORA24-201ENST00000384096 131 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CNTN3Q9P232 PGBD4P5-201ENST00000445958 426 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 RNU2-19P-201ENST00000517288 84 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 AC141557.1-201ENST00000540982 400 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 DNAJC19P9-201ENST00000555084 351 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 AC016717.2-201ENST00000609089 5141 ntBASIC2.66□□□□□ -1.98
CNTN3Q9P232 Y_RNA.93-201ENST00000363066 109 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 RNU4-69P-201ENST00000410677 143 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 RN7SKP192-201ENST00000411291 327 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 AC093850.1-201ENST00000454121 251 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 RNU7-113P-201ENST00000459273 62 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 RNU6-958P-201ENST00000516995 106 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 DEFB131E-201ENST00000532329 154 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 MIR4435-1-201ENST00000582552 80 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 FAM71BP1-201ENST00000604431 523 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 AC103810.6-201ENST00000606708 136 ntBASIC2.65□□□□□ -1.99
CNTN3Q9P232 Y_RNA.10-201ENST00000362371 110 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 MTATP8P2-201ENST00000435212 202 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 RNU7-73P-201ENST00000458743 63 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 RNU6-109P-201ENST00000516364 107 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 RNU6-184P-201ENST00000516514 107 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 SNORD3E-202ENST00000627253 216 ntBASIC2.64□□□□□ -1.99
CNTN3Q9P232 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 MIR424-201ENST00000362227 98 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms