Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNA5SP57-201ENST00000459463 123 ntBASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 MIR181B1-201ENST00000385240 110 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 AL022718.1-201ENST00000412004 84 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 SNORD123-201ENST00000459473 70 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 RNU2-19P-201ENST00000517288 84 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 MIR3163-201ENST00000581592 73 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 HSPE1P19-201ENST00000603327 295 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 uc_338.28-201ENST00000612082 187 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 AC021613.1-201ENST00000623880 111 ntBASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.75□□□□□ -1.97
CXXC1Q9P0U4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 SNORA63.5-201ENST00000363548 123 ntBASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 RNU6-893P-201ENST00000458841 100 ntBASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 AC009831.4-201ENST00000620744 325 ntBASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CXXC1Q9P0U4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.508-201ENST00000384502 114 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 MIR526A1-201ENST00000384897 85 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 RPS29P6-201ENST00000438196 145 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 RPS29P29-201ENST00000456396 171 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 FAM106DP-201ENST00000586416 501 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 AP000942.3-201ENST00000603702 160 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 AC046143.2-201ENST00000609789 160 ntBASIC2.73□□□□□ -1.97
CXXC1Q9P0U4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNU6-32P-201ENST00000383948 107 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNU6-13P-201ENST00000384248 107 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNU6-12P-201ENST00000384604 107 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.549-201ENST00000384657 102 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNU6-41P-201ENST00000384741 107 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNA5SP261-201ENST00000410536 106 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNA5SP144-201ENST00000410846 116 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RPL23AP42-201ENST00000471152 471 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 RNU2-35P-201ENST00000516446 142 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 MIR3152-201ENST00000579801 74 ntBASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.72□□□□□ -1.97
CXXC1Q9P0U4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.71□□□□□ -1.97
CXXC1Q9P0U4 MIR450A1-201ENST00000362262 91 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 MIR1302-5-201ENST00000408164 150 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 AC108729.3-201ENST00000513484 108 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 RNA5SP445-201ENST00000515889 115 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 RNU6-1053P-201ENST00000515930 101 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 RNU6-958P-201ENST00000516995 106 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 MIR4498-201ENST00000577599 66 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 AL035470.1-201ENST00000622571 220 ntBASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXXC1Q9P0U4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 RNU6-106P-201ENST00000384405 107 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 SNORD23.1-201ENST00000408212 104 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AC055731.1-201ENST00000474387 401 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 RNA5SP281-201ENST00000516504 135 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AC022523.2-201ENST00000561045 150 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 MIR548AR-201ENST00000582191 57 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 AC092881.1-201ENST00000638218 2733 ntBASIC2.7□□□□□ -1.98
CXXC1Q9P0U4 Y_RNA.309-201ENST00000365046 111 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 MIR548D2-201ENST00000384955 97 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 RN7SL499P-201ENST00000481141 276 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 RNU6-168P-201ENST00000516189 101 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 AC243994.1-201ENST00000618627 109 ntBASIC2.69□□□□□ -1.98
CXXC1Q9P0U4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 Y_RNA.163-201ENST00000363702 113 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-457P-201ENST00000363999 107 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 SNORA24-201ENST00000384096 131 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-747P-201ENST00000390928 104 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-241P-201ENST00000391148 104 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-554P-201ENST00000410466 106 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RNU6-177P-201ENST00000411257 104 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RPL23AP6-201ENST00000446637 472 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 RPL39P34-201ENST00000477141 156 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 AP004217.1-201ENST00000480579 346 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 SNORA9.3-201ENST00000516383 129 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.68□□□□□ -1.98
CXXC1Q9P0U4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms