Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 RNU2-4P-201ENST00000606190 192 ntBASIC1.38□□□□□ -2.19
DDX4Q9NQI0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
DDX4Q9NQI0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.274-201ENST00000364714 101 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 RNU6-578P-201ENST00000390980 103 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 MIR548O-201ENST00000408583 114 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.37□□□□□ -2.19
DDX4Q9NQI0 RNU7-43P-201ENST00000516554 64 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 RNU6-504P-201ENST00000516568 104 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 RNU6-197P-201ENST00000516680 100 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 AC109810.1-201ENST00000534066 224 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 MIR3664-201ENST00000579074 99 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 AC108706.1-201ENST00000611053 297 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 AC015726.2-201ENST00000620112 122 ntBASIC1.37□□□□□ -2.19
DDX4Q9NQI0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.37□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.75-201ENST00000362927 97 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 RNU6-275P-201ENST00000364910 107 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 SNORA1.2-201ENST00000365189 134 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 RNU6-918P-201ENST00000391219 106 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.622-201ENST00000411091 108 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 SNRPGP8-201ENST00000454064 226 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.644-201ENST00000459006 113 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.674-201ENST00000516362 113 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 AC072026.1-201ENST00000605023 201 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
DDX4Q9NQI0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
DDX4Q9NQI0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.35□□□□□ -2.19
DDX4Q9NQI0 RNU6-888P-201ENST00000363010 101 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.182-201ENST00000363880 111 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.785-201ENST00000384290 109 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 MIR520E-201ENST00000384867 87 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.793-201ENST00000411222 111 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 AL121914.1-201ENST00000450188 156 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 SNORD123-201ENST00000459473 70 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.35□□□□□ -2.19
DDX4Q9NQI0 RNU6-138P-201ENST00000515952 107 ntBASIC1.35□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.29-201ENST00000362570 113 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
DDX4Q9NQI0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.34□□□□□ -2.19
DDX4Q9NQI0 AC087499.4-201ENST00000448505 178 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 RNU7-25P-201ENST00000516544 62 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 SNORA18.7-201ENST00000516910 131 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 MIR3671-201ENST00000580455 88 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
DDX4Q9NQI0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 SNORD115-28-201ENST00000363931 81 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.233-201ENST00000364407 101 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 RNU4-57P-201ENST00000515980 135 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 RNU6-693P-201ENST00000516134 107 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 RNU6-794P-201ENST00000517261 64 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 MRPS18CP4-201ENST00000535821 231 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 AP002392.1-201ENST00000537692 208 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
DDX4Q9NQI0 MIR520C-201ENST00000385005 87 ntBASIC1.32□□□□□ -2.2
DDX4Q9NQI0 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
DDX4Q9NQI0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.32□□□□□ -2.2
DDX4Q9NQI0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.23-201ENST00000362496 106 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.91-201ENST00000363042 107 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RNA5SP48-201ENST00000363969 126 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RNU6-312P-201ENST00000364629 107 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RNU6-47P-201ENST00000383866 107 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 Y_RNA.412-201ENST00000384001 104 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RNU6-643P-201ENST00000384018 107 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 SNORD61-201ENST00000384252 73 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 SNORA81.3-201ENST00000517283 198 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 MIR4764-201ENST00000580680 88 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 AC134878.1-201ENST00000619901 243 ntBASIC1.31□□□□□ -2.2
DDX4Q9NQI0 RNU6-1318P-201ENST00000365389 103 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 MIR548A2-201ENST00000384956 97 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 MIR518F-201ENST00000384973 87 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
DDX4Q9NQI0 RNU7-120P-201ENST00000459334 63 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 AC107297.1-201ENST00000459991 176 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 RNU6-561P-201ENST00000516222 102 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 SNORD116-25-201ENST00000516517 92 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 MIR4431-201ENST00000579990 94 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
DDX4Q9NQI0 U6.106-201ENST00000636360 105 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms