Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH18Q9HCL0 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
PCDH18Q9HCL0 RNA5SP437-201ENST00000517249 129 ntBASIC2.26□□□□□ -2.05
PCDH18Q9HCL0 AC090821.2-201ENST00000523552 176 ntBASIC2.26□□□□□ -2.05
PCDH18Q9HCL0 SNORA28-201ENST00000606769 126 ntBASIC2.26□□□□□ -2.05
PCDH18Q9HCL0 MIR449A-201ENST00000362113 91 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 U8.6-201ENST00000364939 135 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 MIR518A2-201ENST00000384966 87 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 MIR759-201ENST00000390224 91 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 AL034345.1-201ENST00000407768 123 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 MIR1302-5-201ENST00000408164 150 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 RNU7-80P-201ENST00000459562 61 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 AC008413.1-201ENST00000511864 177 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 RNU7-6P-201ENST00000516845 62 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
PCDH18Q9HCL0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 MIR302B-201ENST00000362188 73 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RNY4P6-201ENST00000363667 96 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 Y_RNA.328-201ENST00000365208 113 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RNU6-905P-201ENST00000384434 107 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RNA5SP501-201ENST00000410990 112 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 AL512326.2-201ENST00000426359 151 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 AC087499.4-201ENST00000448505 178 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RPL23AP63-201ENST00000498752 471 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 AC141557.1-201ENST00000540982 400 ntBASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
PCDH18Q9HCL0 RNU6-766P-201ENST00000362478 107 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 RNU6-1131P-201ENST00000364955 107 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 Y_RNA.348-201ENST00000365403 103 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 MIR1267-201ENST00000408723 78 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 RNU2-11P-201ENST00000459191 187 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 IGKV3-31-201ENST00000523109 329 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
PCDH18Q9HCL0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 RNU6-640P-201ENST00000363693 105 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 MIR590-201ENST00000385008 97 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 RNU6-958P-201ENST00000516995 106 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 AC068339.1-201ENST00000526965 141 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
PCDH18Q9HCL0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.49-201ENST00000362714 112 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 UBE2DNL-203ENST00000474922 222 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 MIR5009-201ENST00000578736 100 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 AP001318.4-201ENST00000616637 121 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 AC027279.3-201ENST00000625055 122 ntBASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDH18Q9HCL0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 SNORA63D-201ENST00000364359 132 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 MIR548D2-201ENST00000384955 97 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 AL627390.1-201ENST00000396055 340 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 RNU6-998P-201ENST00000515894 101 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 AC021506.2-201ENST00000612354 169 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDH18Q9HCL0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 RNU6-833P-201ENST00000363486 107 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 MIR520A-201ENST00000384862 85 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 RPL39P25-201ENST00000449384 154 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 RNU7-67P-201ENST00000459003 62 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDH18Q9HCL0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 RNU6-112P-201ENST00000363599 104 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 RNU6-49P-201ENST00000384256 107 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 MIR526A1-201ENST00000384897 85 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 RNA5SP144-201ENST00000410846 116 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 UBL5P3-201ENST00000475112 231 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 AC004812.1-201ENST00000540773 146 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 MIR4709-201ENST00000577272 72 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 AC021613.1-201ENST00000623880 111 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 AC095038.3-201ENST00000634439 195 ntBASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PCDH18Q9HCL0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.17□□□□□ -2.06
PCDH18Q9HCL0 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
PCDH18Q9HCL0 RNU6-296P-201ENST00000384608 107 ntBASIC2.17□□□□□ -2.06
PCDH18Q9HCL0 RNY1P7-201ENST00000384743 110 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms