Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNY4P29-201ENST00000410801 97 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 SNRPGP13-201ENST00000442212 177 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 AC245517.4-201ENST00000448601 281 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 RNU7-25P-201ENST00000516544 62 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 AC022523.2-201ENST00000561045 150 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SEMA4AQ9H3S1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 SNORA2.2-201ENST00000365473 135 ntBASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 SNORD36C-201ENST00000516733 66 ntBASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 AC084364.2-201ENST00000546924 395 ntBASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-690P-201ENST00000365242 106 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 Y_RNA.362-201ENST00000365518 110 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 SNORD24-201ENST00000383884 75 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-1104P-201ENST00000384723 104 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 MIR522-201ENST00000385071 87 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 MIR802-201ENST00000390235 94 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 SNORA26.2-201ENST00000390922 122 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 RNA5SP482-201ENST00000391269 118 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 MIR548O-201ENST00000408583 114 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 RNA5SP136-201ENST00000410906 107 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 AC245047.3-201ENST00000429428 127 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 COX6CP6-201ENST00000490840 228 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 SUMO2P16-201ENST00000519475 264 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 MIR5197-201ENST00000583721 112 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
SEMA4AQ9H3S1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIR499A-201ENST00000384903 122 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIR597-201ENST00000384968 97 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIR518E-201ENST00000385252 88 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 RNU6-844P-201ENST00000517175 102 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 AC141557.1-201ENST00000540982 400 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIR5094-201ENST00000578766 85 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 SNORA28-201ENST00000606769 126 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 snoU13.31-201ENST00000607291 104 ntBASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA4AQ9H3S1 AL589743.1-201ENST00000551932 2712 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 MIR342-201ENST00000362212 99 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 SNORA63D-201ENST00000364359 132 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 RNU4-16P-201ENST00000364737 141 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 SNORA40.13-201ENST00000516379 120 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 MIR4762-201ENST00000585261 75 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 AC021443.1-201ENST00000604478 211 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 AC062037.1-201ENST00000605302 128 ntBASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SEMA4AQ9H3S1 ZNF355P-201ENST00000427301 3216 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.198-201ENST00000364013 98 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 U8.5-201ENST00000364528 136 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.344-201ENST00000365381 112 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-573P-201ENST00000383938 106 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 MIR1302-4-201ENST00000408701 150 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 FTH1P12-201ENST00000432137 551 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 AL606517.2-201ENST00000442855 241 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SEMA4AQ9H3S1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-349P-201ENST00000362402 107 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 RNU1-17P-201ENST00000363022 152 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 RNY1P10-201ENST00000363268 113 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 SNORA3A-201ENST00000364113 130 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 MIR520A-201ENST00000384862 85 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 U8.17-201ENST00000391292 132 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 RPS3AP1-201ENST00000413190 320 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 SNX2P2-201ENST00000424553 323 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-113P-201ENST00000516653 101 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 MIR5009-201ENST00000578736 100 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 AL513534.2-201ENST00000603836 250 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SEMA4AQ9H3S1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RNA5SP173-201ENST00000364857 136 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RN7SKP200-201ENST00000410564 320 ntBASIC2.31□□□□□ -2.04
SEMA4AQ9H3S1 RNU6-938P-201ENST00000411285 103 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms