Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR4762-201ENST00000585261 75 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.67□□□□□ -2.14
CDT1Q9H211 MIR376A2-201ENST00000636782 80 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 Y_RNA.224-201ENST00000364308 111 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 Y_RNA.294-201ENST00000364916 102 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CDT1Q9H211 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 SNORD45.4-201ENST00000516629 73 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 RNU6-971P-201ENST00000516920 106 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 RNU6-1270P-201ENST00000517128 108 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 AC091895.1-201ENST00000624494 256 ntBASIC1.66□□□□□ -2.14
CDT1Q9H211 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.14
CDT1Q9H211 RNU6-199P-201ENST00000362954 107 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 RNU6-268P-201ENST00000364174 107 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 RNU6-959P-201ENST00000384671 107 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.65□□□□□ -2.15
CDT1Q9H211 AC023449.1-201ENST00000454464 154 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 AC114811.1-201ENST00000507207 168 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 MIR3646-201ENST00000578301 84 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 MIR3129-201ENST00000581095 76 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 AL365222.1-201ENST00000614661 98 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.65□□□□□ -2.15
CDT1Q9H211 Y_RNA.218-201ENST00000364218 104 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNU6-424P-201ENST00000384367 105 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 Y_RNA.525-201ENST00000384570 113 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 MIR7-2-201ENST00000384970 110 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 MIR518F-201ENST00000384973 87 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 MIR30A-201ENST00000385092 71 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 SNORA75.5-201ENST00000391291 81 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 MIR513C-201ENST00000401352 84 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 SNORA79-201ENST00000408376 140 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RPL30P13-201ENST00000418873 348 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 AF228730.3-201ENST00000436691 102 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 PGBD4P5-201ENST00000445958 426 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNU6-693P-201ENST00000516134 107 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNU6-1234P-201ENST00000516877 103 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNU6-365P-201ENST00000517113 106 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 SNORA77B-201ENST00000578179 125 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
CDT1Q9H211 RNU6-1084P-201ENST00000362498 107 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 U8.1-201ENST00000362843 134 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 SNORD77.3-201ENST00000391113 65 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 MIR548I2-201ENST00000408348 149 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 MIR1267-201ENST00000408723 78 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 AC004965.1-201ENST00000413033 213 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 AL161935.2-201ENST00000414627 60 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
CDT1Q9H211 AC093850.1-201ENST00000454121 251 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
CDT1Q9H211 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
CDT1Q9H211 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.63□□□□□ -2.15
CDT1Q9H211 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDT1Q9H211 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU6-888P-201ENST00000363010 101 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 SNORA25.7-201ENST00000364375 127 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU6-309P-201ENST00000364573 106 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 Y_RNA.261-201ENST00000364631 102 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 Y_RNA.547-201ENST00000384654 119 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 SNORA40-201ENST00000388090 126 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 MIR1304-201ENST00000408243 91 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU6-938P-201ENST00000411285 103 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU6-1211P-201ENST00000459179 105 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU7-12P-201ENST00000516030 62 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU7-25P-201ENST00000516544 62 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 RNU6-504P-201ENST00000516568 104 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 MIR4778-201ENST00000577635 80 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 AL513423.1-201ENST00000621695 132 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 SNORD3E-202ENST00000627253 216 ntBASIC1.62□□□□□ -2.15
CDT1Q9H211 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDT1Q9H211 Y_RNA.494-201ENST00000384432 111 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 MIR660-201ENST00000385235 97 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 DNAJC19P9-201ENST00000555084 351 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 MIR4662B-201ENST00000579498 81 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 AL365205.2-201ENST00000594586 68 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 AC006441.5-201ENST00000612680 209 ntBASIC1.61□□□□□ -2.15
CDT1Q9H211 Y_RNA.71-201ENST00000362892 104 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 RNU6-915P-201ENST00000364943 103 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 RNU6-22P-201ENST00000384355 107 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 RNU6-163P-201ENST00000384396 106 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CDT1Q9H211 Y_RNA.584-201ENST00000391090 114 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 Y_RNA.714-201ENST00000517065 90 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1440.6 ms