Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 U7.2-201ENST00000607576 63 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 MIR136-201ENST00000385207 82 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 MIR548I2-201ENST00000408348 149 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-938P-201ENST00000411285 103 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 AC004965.1-201ENST00000413033 213 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-62P-201ENST00000516526 102 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 MIR3121-201ENST00000579680 77 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.81□□□□□ -2.12
AMBRA1Q9C0C7 AL442644.1-201ENST00000454390 3105 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-414P-201ENST00000363705 104 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 SNORA2.2-201ENST00000365473 135 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 MTATP6P21-201ENST00000440681 189 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 RNU4-57P-201ENST00000515980 135 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 RNU2-60P-201ENST00000517290 128 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 AP003484.1-201ENST00000530974 250 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.8□□□□□ -2.12
AMBRA1Q9C0C7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-457P-201ENST00000363999 107 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-309P-201ENST00000364573 106 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-22P-201ENST00000384355 107 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 MIR516B2-201ENST00000385190 85 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 U8.17-201ENST00000391292 132 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 JTBP1-201ENST00000441314 247 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 SNORD36C-201ENST00000516733 66 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 SCARNA15-202ENST00000516881 127 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 SUMO2P16-201ENST00000519475 264 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 MIR5197-201ENST00000583721 112 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 MIR376A2-201ENST00000636782 80 ntBASIC1.79□□□□□ -2.12
AMBRA1Q9C0C7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 SNORA40.5-201ENST00000391061 128 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 AC245517.4-201ENST00000448601 281 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 AC095038.3-201ENST00000634439 195 ntBASIC1.78□□□□□ -2.12
AMBRA1Q9C0C7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 MIR378A-201ENST00000362177 66 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.71-201ENST00000362892 104 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 MIR499A-201ENST00000384903 122 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 SNORA18.7-201ENST00000516910 131 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 RNU7-181P-201ENST00000517234 74 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-508P-201ENST00000363231 103 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-80P-201ENST00000384195 107 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 MIR1267-201ENST00000408723 78 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 RNA5SP236-201ENST00000516169 116 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-1234P-201ENST00000516877 103 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 AL022345.2-201ENST00000606307 135 ntBASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.218-201ENST00000364218 104 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 SNORA25.9-201ENST00000365087 128 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 SNORA1.2-201ENST00000365189 134 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 RNU6-1081P-201ENST00000384537 107 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 MIR518E-201ENST00000385252 88 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 AC008267.6-201ENST00000441664 139 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 AC107297.1-201ENST00000459991 176 ntBASIC1.75□□□□□ -2.13
AMBRA1Q9C0C7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms