Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNORA1.2-201ENST00000365189 134 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 RNU6-81P-201ENST00000365608 104 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 SNORD28B-201ENST00000390993 75 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.584-201ENST00000391090 114 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 MIR548I2-201ENST00000408348 149 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 MIR548AR-201ENST00000582191 57 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-34-201ENST00000362441 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-12-201ENST00000362583 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-29-201ENST00000362834 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-9-201ENST00000362912 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-21-201ENST00000362963 81 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-14-201ENST00000363090 81 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-13-201ENST00000363358 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-41-201ENST00000363608 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-11-201ENST00000363616 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-5-201ENST00000363633 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-39-201ENST00000363694 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-4-201ENST00000363810 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-16-201ENST00000363887 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-6-201ENST00000363942 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-42-201ENST00000364273 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-15-201ENST00000364809 81 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-1-201ENST00000364961 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-26-201ENST00000365067 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-10-201ENST00000365073 81 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-43-201ENST00000365503 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-36-201ENST00000365629 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 RNU6-959P-201ENST00000384671 107 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORA40-201ENST00000388090 126 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORA40.5-201ENST00000391061 128 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 RNU6-250P-201ENST00000516958 103 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 AC090821.2-201ENST00000523552 176 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 SNORD115-40-201ENST00000606510 82 ntBASIC2.1□□□□□ -2.07
TRIM55Q9BYV6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.291-201ENST00000364886 113 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 SNORD113-1-201ENST00000365321 69 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.370-201ENST00000365589 108 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.494-201ENST00000384432 111 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 AL023284.1-201ENST00000403956 276 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 RPS26P48-201ENST00000491713 339 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 RNU6-1234P-201ENST00000516877 103 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 AL365222.1-201ENST00000614661 98 ntBASIC2.09□□□□□ -2.07
TRIM55Q9BYV6 SNORD33-201ENST00000362761 85 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 Y_RNA.294-201ENST00000364916 102 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 RNU6-1117P-201ENST00000384525 104 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 AC027119.1-201ENST00000440877 241 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 RNU7-43P-201ENST00000516554 64 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 SCARNA15-202ENST00000516881 127 ntBASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRIM55Q9BYV6 MTND5P32-201ENST00000560711 1802 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 SNORA27-201ENST00000384323 126 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 SNX2P2-201ENST00000424553 323 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 SNORD111.1-201ENST00000516421 86 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 MIR3937-201ENST00000580135 106 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 AC011603.4-201ENST00000611325 277 ntBASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM55Q9BYV6 Y_RNA.218-201ENST00000364218 104 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 Y_RNA.261-201ENST00000364631 102 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 RNU6-915P-201ENST00000364943 103 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 RNU6-22P-201ENST00000384355 107 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 MIR520C-201ENST00000385005 87 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 AC107297.1-201ENST00000459991 176 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 RNU2-60P-201ENST00000517290 128 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 MIR548AI-201ENST00000579940 88 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 MIR4764-201ENST00000580680 88 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 GHRLOS.1-201ENST00000610995 70 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM55Q9BYV6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 U8.1-201ENST00000362843 134 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RNU6-508P-201ENST00000363231 103 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 SNORA22C-201ENST00000384614 134 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 MIR570-201ENST00000384917 97 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RNU6-1154P-201ENST00000391001 104 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 MIR934-201ENST00000401241 83 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RPS29P24-201ENST00000486345 171 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RNU2-13P-201ENST00000515909 113 ntBASIC2.05□□□□□ -2.08
TRIM55Q9BYV6 RNU5E-3P-201ENST00000515913 68 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 812.8 ms