Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RNU6-847P-201ENST00000411115 108 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 SNORD123-201ENST00000459473 70 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-138P-201ENST00000515952 107 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 SNORA18.7-201ENST00000516910 131 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 RNU2-4P-201ENST00000606190 192 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 AC015726.2-201ENST00000620112 122 ntBASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.39□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-200P-201ENST00000364743 107 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.486-201ENST00000384398 107 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 AC107297.1-201ENST00000459991 176 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 SNORD111.1-201ENST00000516421 86 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 RNA5SP480-201ENST00000516840 109 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RNU4-70P-201ENST00000384579 139 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.571-201ENST00000384753 98 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 MIR548O-201ENST00000408583 114 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 AC087499.4-201ENST00000448505 178 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 SNRPGP8-201ENST00000454064 226 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-561P-201ENST00000516222 102 ntBASIC1.37□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-1020P-201ENST00000363684 107 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 AL133373.1-201ENST00000497098 94 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 SNORA31.4-201ENST00000516049 129 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.36□□□□□ -2.19
CLSTN3Q9BQT9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 SNORD45.3-201ENST00000363836 72 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-484P-201ENST00000384016 107 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-578P-201ENST00000390980 103 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 RNU4-43P-201ENST00000410628 137 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-794P-201ENST00000517261 64 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 AC022559.1-201ENST00000520905 205 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 MIR4764-201ENST00000580680 88 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 AC097639.2-201ENST00000603159 172 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 AC108706.1-201ENST00000611053 297 ntBASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.35□□□□□ -2.19
CLSTN3Q9BQT9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-888P-201ENST00000363010 101 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 RNA5SP48-201ENST00000363969 126 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 AL121914.1-201ENST00000450188 156 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 AL138752.1-201ENST00000452964 351 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-693P-201ENST00000516134 107 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 RNU6-197P-201ENST00000516680 100 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 AC109810.1-201ENST00000534066 224 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 AC134878.1-201ENST00000619901 243 ntBASIC1.34□□□□□ -2.19
CLSTN3Q9BQT9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 SNORD115-28-201ENST00000363931 81 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 AC108059.2-201ENST00000434626 151 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 RNU7-25P-201ENST00000516544 62 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 U6.106-201ENST00000636360 105 ntBASIC1.33□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 MTND5P15-201ENST00000434246 349 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 RNU4-57P-201ENST00000515980 135 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 SNORA81.3-201ENST00000517283 198 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 AP002392.1-201ENST00000537692 208 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 AC022709.1-201ENST00000615967 87 ntBASIC1.32□□□□□ -2.2
CLSTN3Q9BQT9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 RNU6-275P-201ENST00000364910 107 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 SNORD61-201ENST00000384252 73 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.31□□□□□ -2.2
CLSTN3Q9BQT9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms