Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU4-70P-201ENST00000384579 139 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 MIR516B2-201ENST00000385190 85 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 AC022559.1-201ENST00000520905 205 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 AL513534.2-201ENST00000603836 250 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.3□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 RNU6-578P-201ENST00000390980 103 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 MTND5P15-201ENST00000434246 349 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 SNRPGP14-201ENST00000435400 219 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 AL138752.1-201ENST00000452964 351 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 RNU6-1299P-201ENST00000516316 100 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 RNU6-922P-201ENST00000516753 99 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 RNU6-794P-201ENST00000517261 64 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 AC090142.3-201ENST00000519012 385 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 AC108706.1-201ENST00000611053 297 ntBASIC1.29□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.242-201ENST00000364473 110 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 SNORD41-201ENST00000386967 70 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 RNU2-55P-201ENST00000411146 174 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.793-201ENST00000411222 111 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 AC108059.2-201ENST00000434626 151 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 AL121914.1-201ENST00000450188 156 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 MIR4662B-201ENST00000579498 81 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 AC006441.5-201ENST00000612680 209 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 AL442644.1-201ENST00000454390 3105 ntBASIC1.28□□□□□ -2.2
RTP3Q9BQQ7 SNORD45.3-201ENST00000363836 72 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 RNU6-728P-201ENST00000365375 104 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 RNU6-484P-201ENST00000384016 107 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.432-201ENST00000384087 111 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 SNORD38C-201ENST00000384381 69 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 RNU6-365P-201ENST00000517113 106 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 AC109810.1-201ENST00000534066 224 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 U6.106-201ENST00000636360 105 ntBASIC1.27□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.29-201ENST00000362570 113 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 MIR15B-201ENST00000385045 98 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 RNU2-70P-201ENST00000410718 179 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 RNU6-322P-201ENST00000516010 103 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 SNORA81.3-201ENST00000517283 198 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 AP002392.1-201ENST00000537692 208 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RTP3Q9BQQ7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 AC004792.1-201ENST00000614523 137 ntBASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RTP3Q9BQQ7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNU6-275P-201ENST00000364910 107 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 SNORD61-201ENST00000384252 73 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.785-201ENST00000384290 109 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 MIR548O-201ENST00000408583 114 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNU6-693P-201ENST00000516134 107 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNA5SP153-201ENST00000516498 76 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNU7-25P-201ENST00000516544 62 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNU6-504P-201ENST00000516568 104 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RNU6-126P-201ENST00000516685 103 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 SNORA18.7-201ENST00000516910 131 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 CYP3A52P-201ENST00000563326 91 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 AC072026.1-201ENST00000605023 201 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 AC015726.2-201ENST00000620112 122 ntBASIC1.24□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 SNORA26-201ENST00000391286 122 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 SNORA79-201ENST00000408376 140 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 RNU6-830P-201ENST00000516353 107 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 RNU6-197P-201ENST00000516680 100 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.23□□□□□ -2.21
RTP3Q9BQQ7 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 RNU4-43P-201ENST00000410628 137 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms