Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 RNU6-309P-201ENST00000364573 106 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 MIR539-201ENST00000365690 78 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 MIR452-201ENST00000385020 85 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 RNU6-938P-201ENST00000411285 103 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 RNU4-57P-201ENST00000515980 135 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 RNU6-1234P-201ENST00000516877 103 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
SNX18Q96RF0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNX18Q96RF0 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 RNU6-22P-201ENST00000384355 107 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 MIR194-1-201ENST00000384892 85 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SNX18Q96RF0 MIR1267-201ENST00000408723 78 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 Y_RNA.692-201ENST00000516627 105 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 SUMO2P16-201ENST00000519475 264 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 AP003484.1-201ENST00000530974 250 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 AL365222.1-201ENST00000614661 98 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 AC106754.2-201ENST00000623006 233 ntBASIC1.72□□□□□ -2.13
SNX18Q96RF0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SNX18Q96RF0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
SNX18Q96RF0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
SNX18Q96RF0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 SNORA2.2-201ENST00000365473 135 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 MIR136-201ENST00000385207 82 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 AL603914.1-201ENST00000401964 204 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 MIR548I2-201ENST00000408348 149 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 RNU6-830P-201ENST00000516353 107 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 SCARNA15-202ENST00000516881 127 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 RNU7-181P-201ENST00000517234 74 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 Y_RNA.757-201ENST00000578934 114 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
SNX18Q96RF0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
SNX18Q96RF0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SNX18Q96RF0 AL442644.1-201ENST00000454390 3105 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 RNU6-235P-201ENST00000362644 107 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX18Q96RF0 MTATP6P21-201ENST00000440681 189 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 AC087499.4-201ENST00000448505 178 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 RNU6-62P-201ENST00000516526 102 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 SNORA18.7-201ENST00000516910 131 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 AL022345.2-201ENST00000606307 135 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
SNX18Q96RF0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNX18Q96RF0 U8.17-201ENST00000391292 132 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 RNA5SP236-201ENST00000516169 116 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 MIR3121-201ENST00000579680 77 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
SNX18Q96RF0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 Y_RNA.291-201ENST00000364886 113 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 RNA5SP259-201ENST00000365541 109 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 RNU6-80P-201ENST00000384195 107 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 MIR513A1-201ENST00000385138 129 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 Y_RNA.651-201ENST00000459380 103 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 RNU6-1333P-201ENST00000516162 93 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
SNX18Q96RF0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SNX18Q96RF0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNX18Q96RF0 MIR342-201ENST00000362212 99 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 Y_RNA.127-201ENST00000363386 109 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORD116-14-201ENST00000383894 92 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORD116-17-201ENST00000383929 92 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORD116-15-201ENST00000384445 92 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORA22C-201ENST00000384614 134 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORD116-19-201ENST00000384729 92 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 RNU2-51P-201ENST00000410708 197 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNX2P2-201ENST00000424553 323 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 AC008267.6-201ENST00000441664 139 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 RNU7-107P-201ENST00000459121 61 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 RNA5SP458-201ENST00000516188 119 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 RNU6-313P-201ENST00000516317 112 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX18Q96RF0 MIR548AI-201ENST00000579940 88 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX18Q96RF0 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
SNX18Q96RF0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNX18Q96RF0 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
SNX18Q96RF0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.66□□□□□ -2.14
SNX18Q96RF0 SNORA27-201ENST00000384323 126 ntBASIC1.66□□□□□ -2.14
SNX18Q96RF0 RNU6-1081P-201ENST00000384537 107 ntBASIC1.66□□□□□ -2.14
SNX18Q96RF0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms