Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
MS4A3Q96HJ5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
MS4A3Q96HJ5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
MS4A3Q96HJ5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
MS4A3Q96HJ5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
MS4A3Q96HJ5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 MAPK10-362ENST00000641864 4484 ntBASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 AC004975.1-201ENST00000428733 208 ntBASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 SNORA25.16-201ENST00000516741 121 ntBASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 MIR548H5-201ENST00000580314 60 ntBASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 MIR7151-201ENST00000617477 60 ntBASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
MS4A3Q96HJ5 Y_RNA.379-201ENST00000365653 102 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 AL139132.1-201ENST00000431587 344 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MIR4491-201ENST00000581087 68 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MIR4264-201ENST00000583520 66 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MIR6867-201ENST00000610636 67 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MIR7702-201ENST00000621931 59 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MIR492-201ENST00000638676 116 ntBASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MS4A3Q96HJ5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 SNORD35B-201ENST00000363660 87 ntBASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 RNU6-382P-201ENST00000365181 106 ntBASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 MIR5684-201ENST00000585074 65 ntBASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 U7.8-201ENST00000619968 63 ntBASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
MS4A3Q96HJ5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 SPRR2C-201ENST00000290702 219 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 MIR101-2-201ENST00000362195 79 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 RNU1-13P-201ENST00000384499 162 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 RN7SL93P-201ENST00000463035 293 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 RPL29P14-201ENST00000495837 428 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 RNU7-143P-201ENST00000516781 65 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 ZYXP1-201ENST00000617638 118 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
MS4A3Q96HJ5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 MIR372-201ENST00000362225 67 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 U8.13-201ENST00000390842 128 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 RNU6-122P-201ENST00000516818 107 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AC007224.1-201ENST00000564410 144 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AC025627.2-201ENST00000576220 160 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AL078603.1-201ENST00000603824 313 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 AC068724.3-201ENST00000625906 87 ntBASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MS4A3Q96HJ5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 MIR597-201ENST00000384968 97 ntBASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 AL159169.1-201ENST00000421119 127 ntBASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 RNU7-170P-201ENST00000459303 61 ntBASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 MIR514B-201ENST00000516774 80 ntBASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 MIR6868-201ENST00000611215 58 ntBASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MS4A3Q96HJ5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 SNORA60-201ENST00000362396 134 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 RNU6-396P-201ENST00000365369 105 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 RNU11-3P-201ENST00000391111 133 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 Y_RNA.588-201ENST00000391254 102 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 AL162151.2-201ENST00000448875 158 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 RNU7-26P-201ENST00000458980 63 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 RNU6-322P-201ENST00000516010 103 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 SNORA70.14-201ENST00000516205 110 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 MIR6798-201ENST00000612887 67 ntBASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
MS4A3Q96HJ5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 AC131280.1-202ENST00000624067 4211 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 Y_RNA.258-201ENST00000364613 105 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 RNA5SP283-201ENST00000365604 119 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 U3.27-201ENST00000391237 200 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 RNU7-62P-201ENST00000458856 62 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 MIR2116-201ENST00000517221 80 ntBASIC3.51□□□□□ -1.85
MS4A3Q96HJ5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms