Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC006254.2-201ENST00000603259 279 ntBASIC2.41□□□□□ -2.02
DDX11Q96FC9 SNRPGP19-201ENST00000603826 189 ntBASIC2.41□□□□□ -2.02
DDX11Q96FC9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.41□□□□□ -2.02
DDX11Q96FC9 AL353997.5-201ENST00000618886 171 ntBASIC2.41□□□□□ -2.02
DDX11Q96FC9 MIR8054-201ENST00000620877 86 ntBASIC2.41□□□□□ -2.02
DDX11Q96FC9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
DDX11Q96FC9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
DDX11Q96FC9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
DDX11Q96FC9 RNU6-1107P-201ENST00000364817 104 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 SNORA2.2-201ENST00000365473 135 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.4□□□□□ -2.03
DDX11Q96FC9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX11Q96FC9 STAG3L5P-204ENST00000443759 179 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 AC025033.1-201ENST00000463883 194 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 Y_RNA.694-201ENST00000516677 117 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
DDX11Q96FC9 AL442644.1-201ENST00000454390 3105 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 ICE2P2-201ENST00000483823 2787 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 SNORA4.2-201ENST00000365313 147 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 SNORD12C-201ENST00000386307 89 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX11Q96FC9 RNU6-440P-201ENST00000390882 105 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
DDX11Q96FC9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX11Q96FC9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX11Q96FC9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 RNU6-905P-201ENST00000384434 107 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 RNU2-40P-201ENST00000410833 196 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 HMGN2P32-201ENST00000444648 269 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 AC114811.1-201ENST00000507207 168 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 RNU6-295P-201ENST00000516901 104 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 MIR4287-201ENST00000579398 78 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 AL035470.1-201ENST00000622571 220 ntBASIC2.38□□□□□ -2.03
DDX11Q96FC9 RNU6-640P-201ENST00000363693 105 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 RNA5SP138-201ENST00000365098 114 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 AC019129.1-201ENST00000403786 261 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 AC087499.4-201ENST00000448505 178 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 HMGN2P23-201ENST00000456759 269 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 RPS29P24-201ENST00000486345 171 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 Y_RNA.677-201ENST00000516401 85 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 RNU6-537P-201ENST00000517277 103 ntBASIC2.37□□□□□ -2.03
DDX11Q96FC9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
DDX11Q96FC9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX11Q96FC9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 RNU6-690P-201ENST00000365242 106 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 Y_RNA.348-201ENST00000365403 103 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 Y_RNA.369-201ENST00000365568 117 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 RNY1P6-201ENST00000384193 109 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 SNORA31.4-201ENST00000516049 129 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 RNY4P20-201ENST00000516678 93 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 AP003484.1-201ENST00000530974 250 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 RNU6-94P-201ENST00000607728 107 ntBASIC2.36□□□□□ -2.03
DDX11Q96FC9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
DDX11Q96FC9 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 MT-TI-201ENST00000387365 69 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 MIR5089-201ENST00000580047 84 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 MIR4448-201ENST00000584360 86 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 AC015726.2-201ENST00000620112 122 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 AC027279.3-201ENST00000625055 122 ntBASIC2.35□□□□□ -2.03
DDX11Q96FC9 Y_RNA.163-201ENST00000363702 113 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 Y_RNA.323-201ENST00000365157 109 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 SNORA51.10-201ENST00000384418 136 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 U8.16-201ENST00000391279 133 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 RNY4P30-201ENST00000410216 95 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 RNA5SP450-201ENST00000411206 102 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX11Q96FC9 RNU6-830P-201ENST00000516353 107 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 HSPE1P19-201ENST00000603327 295 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 AC069114.2-201ENST00000604699 304 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 SNORA28-201ENST00000606769 126 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 uc_338.20-201ENST00000621563 178 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 AC106754.2-201ENST00000623006 233 ntBASIC2.34□□□□□ -2.03
DDX11Q96FC9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.34□□□□□ -2.04
DDX11Q96FC9 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.04
DDX11Q96FC9 RNU6-766P-201ENST00000362478 107 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 RNY4P6-201ENST00000363667 96 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 RNU1-133P-201ENST00000364867 167 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 RNA5SP437-201ENST00000517249 129 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 AC021443.1-201ENST00000604478 211 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
DDX11Q96FC9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms