Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 MTATP6P21-201ENST00000440681 189 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AC092991.1-201ENST00000477176 376 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AC090049.2-201ENST00000550377 109 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.65□□□□□ -2.15
CTHRC1Q96CG8 AL442644.1-201ENST00000454390 3105 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 SNORD33-201ENST00000362761 85 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 RNU4-61P-201ENST00000411243 107 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 RNU6-426P-201ENST00000516464 97 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 RNU6-789P-201ENST00000517105 102 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 AC091895.1-201ENST00000624494 256 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 AC010332.2-201ENST00000613083 1904 ntBASIC1.64□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 TMSB4XP3-201ENST00000445144 114 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 SNORD123-201ENST00000459473 70 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 RNU7-80P-201ENST00000459562 61 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 SNORD36C-201ENST00000516733 66 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 RNU7-70P-201ENST00000516941 66 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 SNORA74.3-201ENST00000517108 154 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 RNU7-181P-201ENST00000517234 74 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 AC015688.6-201ENST00000577737 104 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 MIR5197-201ENST00000583721 112 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 AL513534.2-201ENST00000603836 250 ntBASIC1.63□□□□□ -2.15
CTHRC1Q96CG8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-34-201ENST00000362441 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-12-201ENST00000362583 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-29-201ENST00000362834 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-9-201ENST00000362912 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-21-201ENST00000362963 81 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-14-201ENST00000363090 81 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-13-201ENST00000363358 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-41-201ENST00000363608 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-11-201ENST00000363616 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-5-201ENST00000363633 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-39-201ENST00000363694 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-4-201ENST00000363810 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-16-201ENST00000363887 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-6-201ENST00000363942 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-42-201ENST00000364273 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-15-201ENST00000364809 81 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-1-201ENST00000364961 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-26-201ENST00000365067 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-10-201ENST00000365073 81 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-43-201ENST00000365503 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-36-201ENST00000365629 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.420-201ENST00000384043 110 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORA40-201ENST00000388090 126 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 RNU7-197P-201ENST00000458836 62 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 RNU6-917P-201ENST00000516294 104 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 AP001328.1-201ENST00000528550 176 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 SNORD115-40-201ENST00000606510 82 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 AP001340.1-201ENST00000624405 217 ntBASIC1.62□□□□□ -2.15
CTHRC1Q96CG8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.52-201ENST00000362760 96 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.454-201ENST00000384224 113 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 SNORA27-201ENST00000384323 126 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 RNU6-460P-201ENST00000391158 108 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 RNU6-938P-201ENST00000411285 103 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 AC079140.2-201ENST00000506193 142 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 RNU7-43P-201ENST00000516554 64 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
CTHRC1Q96CG8 RNU6-915P-201ENST00000364943 103 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 SNORA70.7-201ENST00000384159 133 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 SNORA20-201ENST00000384662 132 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 SNX2P2-201ENST00000424553 323 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 RPS26P48-201ENST00000491713 339 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 RNA5SP272-201ENST00000516095 111 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.692-201ENST00000516627 105 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 RNU6-1149P-201ENST00000516810 97 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms