| FOXJ1 | Q92949 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RN7SKP220-201 | ENST00000410611 | 288 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RNU1-143P-201 | ENST00000516296 | 146 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | MIR5094-201 | ENST00000578766 | 85 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RPL12P50-201 | ENST00000603116 | 116 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | U1.23-201 | ENST00000610293 | 146 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RNU1-68P-201 | ENST00000615382 | 146 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | NPPA-AS1_3.1-201 | ENST00000617059 | 108 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | U1.39-201 | ENST00000621562 | 146 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | BCLAF1-205 | ENST00000527536 | 5371 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | Y_RNA.191-201 | ENST00000363972 | 113 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RNU4ATAC3P-201 | ENST00000516699 | 126 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AC009487.2-201 | ENST00000420969 | 6821 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | OXR1-205 | ENST00000442977 | 2956 nt | TSL 2 BASIC | 3.12 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | NBEAL1-203 | ENST00000449802 | 10938 nt | APPRIS P1 TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | PIK3C2G-206 | ENST00000538779 | 4963 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | DOPEY1-203 | ENST00000369739 | 7743 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | CPD-202 | ENST00000543464 | 4007 nt | TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | MIR206-201 | ENST00000384872 | 86 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AC007218.2-201 | ENST00000636913 | 179 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | PHF3-202 | ENST00000393387 | 6947 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | THEMIS-201 | ENST00000368248 | 3866 nt | APPRIS P3 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RPS29P28-201 | ENST00000446439 | 141 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | RNU7-35P-201 | ENST00000517174 | 62 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AC104027.1-201 | ENST00000521887 | 300 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AL033523.1-201 | ENST00000605153 | 153 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | NFIA-AS1-206 | ENST00000630199 | 220 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 3.1 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | ZBBX-204 | ENST00000392767 | 3071 nt | APPRIS ALT2 TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | OR51L1-203 | ENST00000641819 | 7300 nt | APPRIS P1 BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | MIR22-201 | ENST00000362190 | 85 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | Y_RNA.609-201 | ENST00000410669 | 89 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | EEF1A1P41-201 | ENST00000414667 | 207 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | AL161932.1-201 | ENST00000437408 | 146 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | snoU13.16-201 | ENST00000459350 | 104 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | ANKRD18EP-201 | ENST00000405487 | 2632 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| FOXJ1 | Q92949 | KNL1-202 | ENST00000399668 | 7607 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-1244P-201 | ENST00000363614 | 108 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | Y_RNA.316-201 | ENST00000365118 | 111 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | Y_RNA.354-201 | ENST00000365448 | 111 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SNORD67-201 | ENST00000390833 | 111 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RN7SKP123-201 | ENST00000410732 | 291 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-826P-201 | ENST00000516827 | 104 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SNORA31.26-201 | ENST00000517250 | 137 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC073476.4-201 | ENST00000628409 | 72 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SNORD56.3-201 | ENST00000363507 | 71 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU1-109P-201 | ENST00000383960 | 147 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SNORA54-201 | ENST00000384281 | 123 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AL353795.2-201 | ENST00000431804 | 425 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC139453.2-201 | ENST00000487255 | 133 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR4672-201 | ENST00000583126 | 81 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR8055-201 | ENST00000610739 | 97 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SEPT14P17-201 | ENST00000617978 | 177 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AL513423.1-201 | ENST00000621695 | 132 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | FPGT-TNNI3K-202 | ENST00000370895 | 7566 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | TDRD15-201 | ENST00000405799 | 6135 nt | APPRIS P1 TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR148B-201 | ENST00000362252 | 99 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | Y_RNA.567-201 | ENST00000384736 | 106 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR34C-201 | ENST00000384831 | 77 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | FRS2-201 | ENST00000397997 | 6550 nt | APPRIS P1 TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR548G-201 | ENST00000408442 | 89 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC245047.7-201 | ENST00000440265 | 293 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC093850.1-201 | ENST00000454121 | 251 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC007370.2-201 | ENST00000506899 | 2694 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | PNRC2-204 | ENST00000579103 | 171 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-90P-201 | ENST00000606352 | 106 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | ATP2B1-201 | ENST00000261173 | 6777 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-865P-201 | ENST00000364772 | 107 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | U8.9-201 | ENST00000365667 | 134 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-851P-201 | ENST00000384565 | 107 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-447P-201 | ENST00000410293 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-1118P-201 | ENST00000410382 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-1076P-201 | ENST00000410397 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-355P-201 | ENST00000410427 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-791P-201 | ENST00000410467 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-705P-201 | ENST00000410601 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-1100P-201 | ENST00000410691 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-860P-201 | ENST00000410860 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-1217P-201 | ENST00000411276 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | RNU6-785P-201 | ENST00000411324 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | SNORA64.4-201 | ENST00000516632 | 81 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | GTF3AP2-201 | ENST00000557014 | 266 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | MIR3162-201 | ENST00000581818 | 82 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| FOXJ1 | Q92949 | U6.90-201 | ENST00000614007 | 104 nt | BASIC | 3.05 | □□□□□ -1.92 | | |