Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-862P-201ENST00000362804 105 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 AC245047.3-201ENST00000429428 127 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 AC104332.2-201ENST00000429959 156 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 RNU7-45P-201ENST00000459460 63 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 AC006160.2-201ENST00000637708 154 ntBASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SHKBP1Q8TBC3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
SHKBP1Q8TBC3 SNORD116-10-201ENST00000363791 102 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 RNY1P4-201ENST00000384595 115 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 AC069257.2-201ENST00000441819 155 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 AC023141.11-201ENST00000508864 202 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 MIR548AE2-201ENST00000583456 67 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 MIR4662A-201ENST00000637499 67 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 AC092435.3-201ENST00000565538 3654 ntBASIC2.71□□□□□ -1.98
SHKBP1Q8TBC3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 MIRLET7C-201ENST00000362160 84 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP139-201ENST00000364340 117 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-776P-201ENST00000364403 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-1022P-201ENST00000365049 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 SNORD58A-201ENST00000383875 65 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-1319P-201ENST00000390855 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-747P-201ENST00000390928 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-241P-201ENST00000391148 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 MIR1261-201ENST00000408659 82 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-177P-201ENST00000411257 104 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 AC073261.1-201ENST00000429409 121 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 AC139453.2-201ENST00000487255 133 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 MIR4439-201ENST00000583746 80 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 AC103810.6-201ENST00000606708 136 ntBASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
SHKBP1Q8TBC3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-163P-201ENST00000384396 106 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-160P-201ENST00000384591 107 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-443P-201ENST00000384780 107 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 SNORD77B-201ENST00000391112 67 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 RNU7-181P-201ENST00000517234 74 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 SNORD53-201ENST00000579969 78 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 MIR6841-201ENST00000637129 72 ntBASIC2.69□□□□□ -1.98
SHKBP1Q8TBC3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 CD24P4-201ENST00000382840 243 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 U8.15-201ENST00000390947 134 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP109-201ENST00000391010 116 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 Y_RNA.611-201ENST00000410682 108 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNU1-41P-201ENST00000516161 162 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNU1-48P-201ENST00000516400 162 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP24-201ENST00000516478 95 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP33-201ENST00000516687 98 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 AC096720.1-201ENST00000604441 183 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 AC027279.3-201ENST00000625055 122 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 AL512310.12-203ENST00000640543 90 ntBASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHKBP1Q8TBC3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-509P-201ENST00000363519 107 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 SNORA1.1-201ENST00000364671 133 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-652P-201ENST00000365488 107 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 Y_RNA.430-201ENST00000384081 110 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 MIR1267-201ENST00000408723 78 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 AC015922.2-201ENST00000435593 184 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 STAG3L5P-204ENST00000443759 179 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 MIR548BB-201ENST00000626714 66 ntBASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SHKBP1Q8TBC3 SNORA22.1-201ENST00000362701 134 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 2120.1 ms