Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 MIR520C-201ENST00000385005 87 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 SNORA26-201ENST00000391286 122 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
BEST2Q8NFU1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 RNU6-138P-201ENST00000515952 107 ntBASIC1.33□□□□□ -2.2
BEST2Q8NFU1 SNORD28B-201ENST00000390993 75 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 U8.17-201ENST00000391292 132 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 SNORA79-201ENST00000408376 140 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.32□□□□□ -2.2
BEST2Q8NFU1 RNU4-57P-201ENST00000515980 135 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 RNA5SP153-201ENST00000516498 76 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 RNU6-504P-201ENST00000516568 104 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 RNU6-197P-201ENST00000516680 100 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 AC022559.1-201ENST00000520905 205 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 AC007751.1-201ENST00000529260 376 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 MIR4764-201ENST00000580680 88 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 AC090425.1-201ENST00000610007 140 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 AL096861.1-201ENST00000610899 123 ntBASIC1.32□□□□□ -2.2
BEST2Q8NFU1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
BEST2Q8NFU1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.31□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 RNU6-200P-201ENST00000364743 107 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 SNORD24-201ENST00000383884 75 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 MIR548A2-201ENST00000384956 97 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 MIR518F-201ENST00000384973 87 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 U6.106-201ENST00000636360 105 ntBASIC1.31□□□□□ -2.2
BEST2Q8NFU1 SNORD115-28-201ENST00000363931 81 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.412-201ENST00000384001 104 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 RNU7-43P-201ENST00000516554 64 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 MIR3192-201ENST00000584920 77 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 AC097639.2-201ENST00000603159 172 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
BEST2Q8NFU1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
BEST2Q8NFU1 RNU6-888P-201ENST00000363010 101 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 RNU6-275P-201ENST00000364910 107 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 MIR570-201ENST00000384917 97 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 RNU4-43P-201ENST00000410628 137 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 RNU7-41P-201ENST00000515917 61 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
BEST2Q8NFU1 AC091895.1-201ENST00000624494 256 ntBASIC1.29□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 RNU6-847P-201ENST00000411115 108 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 MTND5P15-201ENST00000434246 349 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 AL138752.1-201ENST00000452964 351 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 AP002392.1-201ENST00000537692 208 ntBASIC1.28□□□□□ -2.2
BEST2Q8NFU1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.28□□□□□ -2.2
BEST2Q8NFU1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
BEST2Q8NFU1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 Y_RNA.75-201ENST00000362927 97 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 SNORA1.2-201ENST00000365189 134 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 RNU6-1318P-201ENST00000365389 103 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 SNORA31.2-201ENST00000516019 134 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 AC008133.2-201ENST00000624540 351 ntBASIC1.27□□□□□ -2.21
BEST2Q8NFU1 RNU6-643P-201ENST00000384018 107 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 SNORA1-201ENST00000384107 130 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 AF228730.3-201ENST00000436691 102 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 SNORD36C-201ENST00000516733 66 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 MRPS18CP4-201ENST00000535821 231 ntBASIC1.26□□□□□ -2.21
BEST2Q8NFU1 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 RNU6-938P-201ENST00000411285 103 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC006461.1-201ENST00000412637 326 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC245047.7-201ENST00000440265 293 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 SNORA81.3-201ENST00000517283 198 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC090821.2-201ENST00000523552 176 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC072026.1-201ENST00000605023 201 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 AC134878.1-201ENST00000619901 243 ntBASIC1.25□□□□□ -2.21
BEST2Q8NFU1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
BEST2Q8NFU1 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
BEST2Q8NFU1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.24□□□□□ -2.21
BEST2Q8NFU1 AP003484.1-201ENST00000530974 250 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 MIR378D2-201ENST00000580636 98 ntBASIC1.24□□□□□ -2.21
BEST2Q8NFU1 MIR3129-201ENST00000581095 76 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms