Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 Y_RNA.366-201ENST00000365540 102 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 Y_RNA.500-201ENST00000384466 111 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HIPK4Q8NE63 UBE2DNL-203ENST00000474922 222 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 SNORA31.4-201ENST00000516049 129 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 RNU6-240P-201ENST00000516098 97 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 MIR4672-201ENST00000583126 81 ntBASIC2.03□□□□□ -2.08
HIPK4Q8NE63 RNU1-133P-201ENST00000364867 167 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 SNORD28B-201ENST00000390993 75 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 SNORD123-201ENST00000459473 70 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RNU7-80P-201ENST00000459562 61 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RPS29P24-201ENST00000486345 171 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RNU6-998P-201ENST00000515894 101 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RNU6-917P-201ENST00000516294 104 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 SUMO2P16-201ENST00000519475 264 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 FAM106DP-201ENST00000586416 501 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
HIPK4Q8NE63 RNU6-215P-201ENST00000365169 102 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 RNY1P6-201ENST00000384193 109 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 SNORD20-201ENST00000384550 80 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 JTBP1-201ENST00000441314 247 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 RNU7-96P-201ENST00000459535 64 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 RNU2-13P-201ENST00000515909 113 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 SNORD33.1-201ENST00000516213 88 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 RNU7-70P-201ENST00000516941 66 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 MIR548AR-201ENST00000582191 57 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 AL137067.1-201ENST00000615933 120 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 AC106754.2-201ENST00000623006 233 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 U6.95-201ENST00000636931 70 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HIPK4Q8NE63 AL596211.1-201ENST00000569873 2277 ntBASIC2.01□□□□□ -2.09
HIPK4Q8NE63 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
HIPK4Q8NE63 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 SNORA1.2-201ENST00000365189 134 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 Y_RNA.370-201ENST00000365589 108 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 Y_RNA.454-201ENST00000384224 113 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 SNX2P2-201ENST00000424553 323 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
HIPK4Q8NE63 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
HIPK4Q8NE63 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HIPK4Q8NE63 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HIPK4Q8NE63 MIR449A-201ENST00000362113 91 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 MIR342-201ENST00000362212 99 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 RNU4-82P-201ENST00000362443 140 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 RNU6-690P-201ENST00000365242 106 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 RNU6-476P-201ENST00000384726 107 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 RNU6-1064P-201ENST00000410626 104 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 SNORA74.3-201ENST00000517108 154 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 HSPE1P19-201ENST00000603327 295 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 AC025166.1-201ENST00000612411 163 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 uc_338.20-201ENST00000621563 178 ntBASIC1.99□□□□□ -2.09
HIPK4Q8NE63 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HIPK4Q8NE63 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HIPK4Q8NE63 RNU6-1056P-201ENST00000383996 107 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 RNU6-1144P-201ENST00000384247 104 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 RNU6-429P-201ENST00000384582 108 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 MIR1263-201ENST00000408324 86 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 SNORA77B-201ENST00000578179 125 ntBASIC1.98□□□□□ -2.09
HIPK4Q8NE63 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
HIPK4Q8NE63 MTND5P18-201ENST00000445624 1801 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 RNA5SP289-201ENST00000362332 137 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 RNU6-1325P-201ENST00000364905 105 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 SNORA24-201ENST00000384096 131 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 AC107297.1-201ENST00000459991 176 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
HIPK4Q8NE63 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
HIPK4Q8NE63 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.96□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.346-201ENST00000365385 112 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 MIR570-201ENST00000384917 97 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 MIR513A1-201ENST00000385138 129 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HIPK4Q8NE63 AL035398.1-201ENST00000430869 322 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 RNU2-11P-201ENST00000459191 187 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 SNORA59A-201ENST00000459326 152 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
HIPK4Q8NE63 MIR6129-201ENST00000616087 109 ntBASIC1.96□□□□□ -2.1
HIPK4Q8NE63 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 RNU4-16P-201ENST00000364737 141 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.528-201ENST00000384575 108 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms