Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 AP001328.1-201ENST00000528550 176 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 MIR8074-201ENST00000615081 81 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 RNU6-915P-201ENST00000364943 103 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 SNORD18B-201ENST00000365659 72 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 SNORA19-201ENST00000384737 128 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 MIR526A1-201ENST00000384897 85 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 MIR764-201ENST00000390811 85 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 AL606753.1-201ENST00000427435 87 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 AL591806.2-201ENST00000433122 173 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 RNU4-57P-201ENST00000515980 135 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 MIR376A2-201ENST00000636782 80 ntBASIC1.49□□□□□ -2.17
CLIP4Q8N3C7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 MTND5P32-201ENST00000560711 1802 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 RNU6-81P-201ENST00000365608 104 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 MIR1267-201ENST00000408723 78 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 RNU6-938P-201ENST00000411285 103 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 AC087499.4-201ENST00000448505 178 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 snoU13.23-201ENST00000458863 104 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 AC108210.2-201ENST00000503681 201 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 SNORD36C-201ENST00000516733 66 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.48□□□□□ -2.17
CLIP4Q8N3C7 RNA5SP432-201ENST00000362480 116 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 SNORA2.2-201ENST00000365473 135 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 U8.17-201ENST00000391292 132 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 RNU6-1211P-201ENST00000459179 105 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 RNU7-181P-201ENST00000517234 74 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 AP003484.1-201ENST00000530974 250 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 AC011603.4-201ENST00000611325 277 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 TUG1_4.1-201ENST00000619464 181 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 U2.22-201ENST00000636441 106 ntBASIC1.47□□□□□ -2.17
CLIP4Q8N3C7 RNA5SP259-201ENST00000365541 109 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 RNU6-971P-201ENST00000516920 106 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 RNU2-60P-201ENST00000517290 128 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 AC015712.3-201ENST00000559380 164 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 MIR4255-201ENST00000579351 72 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 MIR5197-201ENST00000583721 112 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 MIR4769-201ENST00000584126 77 ntBASIC1.46□□□□□ -2.18
CLIP4Q8N3C7 AL442644.1-201ENST00000454390 3105 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 RNU6-508P-201ENST00000363231 103 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 RNU6-309P-201ENST00000364573 106 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 RNU6-959P-201ENST00000384671 107 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 MIR513A1-201ENST00000385138 129 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 SNORA25.15-201ENST00000516487 89 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 SCARNA15-202ENST00000516881 127 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 SNORA18.7-201ENST00000516910 131 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLIP4Q8N3C7 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 MIR539-201ENST00000365690 78 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 SNORA40.5-201ENST00000391061 128 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 SNORA26.9-201ENST00000391322 122 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 AL603914.1-201ENST00000401964 204 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 MTATP6P21-201ENST00000440681 189 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 SNORD123-201ENST00000459473 70 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 RPS26P48-201ENST00000491713 339 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 MIR3121-201ENST00000579680 77 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 MIR548AR-201ENST00000582191 57 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 U7.2-201ENST00000607576 63 ntBASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CLIP4Q8N3C7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 SNORA1.2-201ENST00000365189 134 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 SNORA27-201ENST00000384323 126 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 snoU13.9-201ENST00000458927 103 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms