Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 RNU6-394P-201ENST00000410735 107 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 BTF3P4-201ENST00000418852 495 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 RNU6-830P-201ENST00000516353 107 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
CHPFQ8IZ52 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CHPFQ8IZ52 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CHPFQ8IZ52 RNU6-888P-201ENST00000363010 101 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 Y_RNA.547-201ENST00000384654 119 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 RNU6-947P-201ENST00000516264 106 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 RNU7-25P-201ENST00000516544 62 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 SNORA18.7-201ENST00000516910 131 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 MIR3144-201ENST00000579460 79 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
CHPFQ8IZ52 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CHPFQ8IZ52 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHPFQ8IZ52 AL442644.1-201ENST00000454390 3105 ntBASIC1.7□□□□□ -2.14
CHPFQ8IZ52 SNORA25.7-201ENST00000364375 127 ntBASIC1.7□□□□□ -2.14
CHPFQ8IZ52 RNU6-449P-201ENST00000383914 107 ntBASIC1.7□□□□□ -2.14
CHPFQ8IZ52 SNORD116-18-201ENST00000383961 92 ntBASIC1.7□□□□□ -2.14
CHPFQ8IZ52 RNU7-121P-201ENST00000516604 62 ntBASIC1.7□□□□□ -2.14
CHPFQ8IZ52 RNU6-978P-201ENST00000364371 103 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 Y_RNA.393-201ENST00000383936 102 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 RNU6-768P-201ENST00000384683 107 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 MIR518F-201ENST00000384973 87 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 SNORD123-201ENST00000459473 70 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.69□□□□□ -2.14
CHPFQ8IZ52 RNU6-165P-201ENST00000517170 99 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 DNAJC19P2-201ENST00000593340 302 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 AC021753.1-201ENST00000635724 168 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 MIR6844-201ENST00000637122 62 ntBASIC1.69□□□□□ -2.14
CHPFQ8IZ52 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
CHPFQ8IZ52 SNORD115-28-201ENST00000363931 81 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 Y_RNA.398-201ENST00000383952 99 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 MIR548A2-201ENST00000384956 97 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 Y_RNA.580-201ENST00000391004 95 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 SNORD37.2-201ENST00000391075 66 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 SNORD111.1-201ENST00000516421 86 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 RNU7-43P-201ENST00000516554 64 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 AC007751.1-201ENST00000529260 376 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 AC134878.1-201ENST00000619901 243 ntBASIC1.68□□□□□ -2.14
CHPFQ8IZ52 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHPFQ8IZ52 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHPFQ8IZ52 RNU6-151P-201ENST00000364158 107 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 RNU6-1130P-201ENST00000365434 107 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 RNU6-597P-201ENST00000365620 102 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 RNU6-1062P-201ENST00000383908 107 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 SNORA1-201ENST00000384107 130 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 SNORD26-201ENST00000384147 75 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 MIR520C-201ENST00000385005 87 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 MIR3129-201ENST00000581095 76 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 MTND1P7-201ENST00000632801 297 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
CHPFQ8IZ52 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHPFQ8IZ52 Y_RNA.542-201ENST00000384641 111 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 U8.17-201ENST00000391292 132 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.66□□□□□ -2.14
CHPFQ8IZ52 AF228730.3-201ENST00000436691 102 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 SNORA18.4-201ENST00000516440 124 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 RNU6-1212P-201ENST00000517023 104 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 MIR3646-201ENST00000578301 84 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 MIR3658-201ENST00000636291 56 ntBASIC1.66□□□□□ -2.14
CHPFQ8IZ52 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHPFQ8IZ52 Y_RNA.37-201ENST00000362606 108 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 AC087499.4-201ENST00000448505 178 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 RNU6-255P-201ENST00000516957 105 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 DNAJC19P9-201ENST00000555084 351 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 MIR4764-201ENST00000580680 88 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 AL365205.2-201ENST00000594586 68 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 Y_RNA.778-201ENST00000620203 90 ntBASIC1.65□□□□□ -2.15
CHPFQ8IZ52 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHPFQ8IZ52 RNU6-1067P-201ENST00000384752 107 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 SNORA75.5-201ENST00000391291 81 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 RNA5SP247-201ENST00000411181 105 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 RNU6-1054P-201ENST00000411293 104 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.64□□□□□ -2.15
CHPFQ8IZ52 RNU4-57P-201ENST00000515980 135 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 RNU7-181P-201ENST00000517234 74 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 MTND5P41-201ENST00000517498 206 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
CHPFQ8IZ52 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.64□□□□□ -2.15
CHPFQ8IZ52 Y_RNA.170-201ENST00000363746 110 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 SNORA1.2-201ENST00000365189 134 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU4-11P-201ENST00000365287 132 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU6-1292P-201ENST00000383856 107 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU6-1336P-201ENST00000383886 109 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU6-1189P-201ENST00000383958 107 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 Y_RNA.410-201ENST00000383992 113 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 SNORD77.3-201ENST00000391113 65 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNU6-588P-201ENST00000410281 105 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 RNA5SP127-201ENST00000411051 133 ntBASIC1.63□□□□□ -2.15
CHPFQ8IZ52 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms