Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 RNU7-35P-201ENST00000517174 62 ntBASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC116Q8IYX3 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 MIR548G-201ENST00000408442 89 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC116Q8IYX3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CCDC116Q8IYX3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC116Q8IYX3 RNU6-457P-201ENST00000363999 107 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 RNU6-865P-201ENST00000364772 107 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 Y_RNA.448-201ENST00000384185 108 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 RNU6-524P-201ENST00000384270 107 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 MIR526A1-201ENST00000384897 85 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 AL161932.1-201ENST00000437408 146 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 MIR4712-201ENST00000583750 82 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 AP000648.3-201ENST00000623539 4507 ntBASIC3□□□□□ -1.93
CCDC116Q8IYX3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC116Q8IYX3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 MIR597-201ENST00000384968 97 ntBASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 RNU1-98P-201ENST00000458992 160 ntBASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 SNORD67.1-201ENST00000516618 108 ntBASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 RNU6-90P-201ENST00000606352 106 ntBASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC116Q8IYX3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 RNU6-788P-201ENST00000390967 104 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 RPL31P63-201ENST00000422565 375 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 snoU13.16-201ENST00000459350 104 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 RPL12P50-201ENST00000603116 116 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 MIR8055-201ENST00000610739 97 ntBASIC2.98□□□□□ -1.93
CCDC116Q8IYX3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 MIR519C-201ENST00000385053 87 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 RNU6-613P-201ENST00000410412 108 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 AC092427.1-202ENST00000430569 476 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 SPINT5P-201ENST00000448174 155 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 MIR8065-201ENST00000620577 100 ntBASIC2.97□□□□□ -1.93
CCDC116Q8IYX3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.96□□□□□ -1.93
CCDC116Q8IYX3 RNVU1-14-201ENST00000384770 164 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 AC093729.1-201ENST00000513074 128 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 RNU7-79P-201ENST00000516082 62 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 AL513043.2-201ENST00000573941 143 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 AL513423.1-201ENST00000621695 132 ntBASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC116Q8IYX3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 RNU11-3P-201ENST00000391111 133 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 RPL23AP6-201ENST00000446637 472 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 RN7SL863P-201ENST00000462370 296 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 MIR5680-201ENST00000577577 84 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 AC021506.2-201ENST00000612354 169 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 AC105081.1-201ENST00000617727 106 ntBASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC116Q8IYX3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 RNU1-91P-201ENST00000364746 163 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 MIR660-201ENST00000385235 97 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 AC104389.3-201ENST00000445629 235 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 MIR3126-201ENST00000577443 74 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 FAM106DP-201ENST00000586416 501 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 AC020891.4-201ENST00000605745 93 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 MIR7112-201ENST00000616126 65 ntBASIC2.94□□□□□ -1.94
CCDC116Q8IYX3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 MIR148B-201ENST00000362252 99 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 SNORD114-10-201ENST00000363409 72 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 RNA5SP138-201ENST00000365098 114 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 SNORD38.2-201ENST00000384470 69 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 SNORD15B-201ENST00000384714 146 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 RNU2-7P-201ENST00000410794 178 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 325.7 ms