Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RETREG3Q86VR2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
RETREG3Q86VR2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RETREG3Q86VR2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RETREG3Q86VR2 SNORA71.3-201ENST00000362582 128 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 SNORA38-201ENST00000363946 132 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 Y_RNA.316-201ENST00000365118 111 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 AC073261.1-201ENST00000429409 121 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 RNU1-98P-201ENST00000458992 160 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 AC099513.1-201ENST00000490423 301 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 AC105081.1-201ENST00000617727 106 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 AC012314.7-201ENST00000619693 93 ntBASIC3.08□□□□□ -1.92
RETREG3Q86VR2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RETREG3Q86VR2 SNORD38.2-201ENST00000384470 69 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 MIR518A2-201ENST00000384966 87 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 RNU6-1321P-201ENST00000390905 107 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 PRSS3P4-201ENST00000453323 162 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.07□□□□□ -1.92
RETREG3Q86VR2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.07□□□□□ -1.92
RETREG3Q86VR2 SUB1P4-201ENST00000566062 339 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 Z97988.1-201ENST00000637697 135 ntBASIC3.07□□□□□ -1.92
RETREG3Q86VR2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RETREG3Q86VR2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETREG3Q86VR2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RETREG3Q86VR2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETREG3Q86VR2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETREG3Q86VR2 SNORD114-10-201ENST00000363409 72 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 RNU6-112P-201ENST00000363599 104 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 SNORD46.1-201ENST00000364139 104 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 CYP3A52P-201ENST00000563326 91 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
RETREG3Q86VR2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 MIR424-201ENST00000362227 98 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 SNORA63.1-201ENST00000362493 131 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-457P-201ENST00000363999 107 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNA5SP72-201ENST00000364442 117 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNA5SP138-201ENST00000365098 114 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-296P-201ENST00000384608 107 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 AL023284.1-201ENST00000403956 276 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-447P-201ENST00000410293 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-1118P-201ENST00000410382 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-1076P-201ENST00000410397 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-355P-201ENST00000410427 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-791P-201ENST00000410467 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-705P-201ENST00000410601 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-1100P-201ENST00000410691 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-860P-201ENST00000410860 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-602P-201ENST00000411155 105 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-1217P-201ENST00000411276 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU6-785P-201ENST00000411324 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 AL161932.1-201ENST00000437408 146 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU7-43P-201ENST00000516554 64 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 RNU7-137P-201ENST00000516788 62 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 U6.90-201ENST00000614007 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 U6.70-201ENST00000620287 104 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 AC008133.2-201ENST00000624540 351 ntBASIC3.05□□□□□ -1.92
RETREG3Q86VR2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RETREG3Q86VR2 SNORD115-27-201ENST00000364430 82 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 RPL31P63-201ENST00000422565 375 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 RNU7-48P-201ENST00000458875 63 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 AC234781.5-201ENST00000508429 271 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 MTND5P40-201ENST00000559945 246 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
RETREG3Q86VR2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RETREG3Q86VR2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RETREG3Q86VR2 Y_RNA.98-201ENST00000363109 102 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 RNA5SP50-201ENST00000363731 107 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 RNA5SP501-201ENST00000410990 112 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 UBBP3-201ENST00000445497 241 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 MIR4764-201ENST00000580680 88 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 AC012676.2-201ENST00000619258 186 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.03□□□□□ -1.92
RETREG3Q86VR2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.03□□□□□ -1.93
RETREG3Q86VR2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RETREG3Q86VR2 MIR519C-201ENST00000385053 87 ntBASIC3.02□□□□□ -1.93
RETREG3Q86VR2 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
RETREG3Q86VR2 AL513043.2-201ENST00000573941 143 ntBASIC3.02□□□□□ -1.93
RETREG3Q86VR2 MIR4276-201ENST00000584832 70 ntBASIC3.02□□□□□ -1.93
RETREG3Q86VR2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RETREG3Q86VR2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.01□□□□□ -1.93
RETREG3Q86VR2 RNU6-524P-201ENST00000384270 107 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 RNU6-1237P-201ENST00000384777 107 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 AC105272.1-201ENST00000438604 198 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 RN7SL293P-201ENST00000481765 281 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 MIR3922-201ENST00000585192 84 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 SNORD14A-201ENST00000606526 91 ntBASIC3.01□□□□□ -1.93
RETREG3Q86VR2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RETREG3Q86VR2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RETREG3Q86VR2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RETREG3Q86VR2 Y_RNA.94-201ENST00000363068 106 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms