Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNU6-118P-201ENST00000516552 102 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 RNU6-86P-201ENST00000606534 107 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 AC092954.2-201ENST00000609103 430 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 MTND5P18-201ENST00000445624 1801 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 SNORD115-25-201ENST00000362619 82 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 RNU6-767P-201ENST00000384132 107 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 MIR527-201ENST00000385244 85 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 RNU6-980P-201ENST00000516925 103 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 AC132825.6-201ENST00000638861 357 ntBASIC-0.8□□□□□ -2.54
CSMD3Q7Z407 MIR302B-201ENST00000362188 73 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 MIR342-201ENST00000362212 99 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU4-70P-201ENST00000384579 139 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNA5SP237-201ENST00000410414 113 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-189P-201ENST00000516120 101 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU7-25P-201ENST00000516544 62 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AC092807.2-201ENST00000609367 243 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AL445584.3-201ENST00000617173 78 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 MIR626-201ENST00000385032 94 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 MIR8485-201ENST00000401372 91 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AC098614.3-201ENST00000438957 440 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 TPTE2P5-203ENST00000458118 728 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-893P-201ENST00000458841 100 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 Vault.3-201ENST00000516676 95 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AC007494.3-201ENST00000624660 743 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 SNORA63.5-201ENST00000363548 123 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-268P-201ENST00000364174 107 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-540P-201ENST00000384622 101 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AL031667.1-201ENST00000440222 725 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU7-96P-201ENST00000459535 64 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-693P-201ENST00000516134 107 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 MIR4999-201ENST00000585029 91 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 AP001282.2-201ENST00000616149 309 ntBASIC-0.81□□□□□ -2.54
CSMD3Q7Z407 RNU6-74P-201ENST00000384235 107 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU6-429P-201ENST00000384582 108 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 MIR518B-201ENST00000385127 83 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 MTCO3P40-201ENST00000392516 676 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 MTCO2P16-201ENST00000436962 677 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNA5SP272-201ENST00000516095 111 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU7-149P-201ENST00000516739 59 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 SNORA40.17-201ENST00000517256 115 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNA5SP245-201ENST00000364239 121 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 SNORD115-44-201ENST00000365391 82 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 MIR548O-201ENST00000408583 114 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU7-188P-201ENST00000517063 64 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 AC099654.13-201ENST00000639774 207 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU6-82P-201ENST00000363970 107 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 MIR548I2-201ENST00000408348 149 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 USP9YP12-201ENST00000450481 570 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU7-104P-201ENST00000459398 79 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 RNU7-55P-201ENST00000459426 62 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 AL442663.2-201ENST00000554385 511 ntBASIC-0.82□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNU6-456P-201ENST00000384493 107 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 MIR181B2-201ENST00000385004 89 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 SNORD115-47-201ENST00000391226 86 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNU6-228P-201ENST00000362700 106 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 AC073415.1-201ENST00000449240 153 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNA5SP484-201ENST00000458857 111 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNU6-276P-201ENST00000516114 96 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 MIR4703-201ENST00000577728 79 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 AC006566.1-201ENST00000608943 513 ntBASIC-0.83□□□□□ -2.54
CSMD3Q7Z407 RNU6-291P-201ENST00000384720 107 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 MIR548H1-201ENST00000408610 102 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 SNORA36B-201ENST00000410438 131 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 MTND3P8-201ENST00000412909 339 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 MIR5692C1-201ENST00000585309 91 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 RNY1P16-201ENST00000363063 111 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 RNU6-281P-201ENST00000384212 103 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 RNU6-154P-201ENST00000384306 106 ntBASIC-0.84□□□□□ -2.54
CSMD3Q7Z407 AC096949.1-201ENST00000412047 152 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms