Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 SNRPGP8-201ENST00000454064 226 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 RPS29P29-201ENST00000456396 171 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 AC079140.2-201ENST00000506193 142 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 RNU6-126P-201ENST00000516685 103 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 AC006441.5-201ENST00000612680 209 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.73□□□□□ -2.13
KRT28Q7Z3Y7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 RNU6-682P-201ENST00000363843 106 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 RNU6-275P-201ENST00000364910 107 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 Y_RNA.432-201ENST00000384087 111 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 SNORA79-201ENST00000408376 140 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 RNU2-70P-201ENST00000410718 179 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 AC015922.2-201ENST00000435593 184 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 RNU6-322P-201ENST00000516010 103 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 AC109810.1-201ENST00000534066 224 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 AP002392.1-201ENST00000537692 208 ntBASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
KRT28Q7Z3Y7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 MIR516B2-201ENST00000385190 85 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 SNORA26-201ENST00000391286 122 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-561P-201ENST00000516222 102 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 RNA5SP153-201ENST00000516498 76 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-365P-201ENST00000517113 106 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 MIR3937-201ENST00000580135 106 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 MIR3668-201ENST00000582138 75 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 FTX_2.1-201ENST00000618816 94 ntBASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 SNORD45.3-201ENST00000363836 72 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-268P-201ENST00000364174 107 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 SNORA2.2-201ENST00000365473 135 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 MIR136-201ENST00000385207 82 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 MIR653-201ENST00000385279 96 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 AC022559.1-201ENST00000520905 205 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 AL365434.2-201ENST00000607979 234 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 U6.106-201ENST00000636360 105 ntBASIC1.7□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 MIR222-201ENST00000384992 110 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 MIR15B-201ENST00000385045 98 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 PCNPP3-201ENST00000393579 471 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-830P-201ENST00000516353 107 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-182P-201ENST00000516970 105 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 AC090142.3-201ENST00000519012 385 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-312P-201ENST00000364629 107 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 RNY1P4-201ENST00000384595 115 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 MIR526A1-201ENST00000384897 85 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 RNU1-78P-201ENST00000391248 165 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 AL451046.2-201ENST00000403074 277 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-922P-201ENST00000516753 99 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 AC090049.2-201ENST00000550377 109 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 AC098479.1-201ENST00000609225 154 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 AC015726.2-201ENST00000620112 122 ntBASIC1.68□□□□□ -2.14
KRT28Q7Z3Y7 SNORD24-201ENST00000383884 75 ntBASIC1.67□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.67□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-197P-201ENST00000516680 100 ntBASIC1.67□□□□□ -2.14
KRT28Q7Z3Y7 RN7SL793P-201ENST00000583259 296 ntBASIC1.67□□□□□ -2.14
KRT28Q7Z3Y7 AL513534.2-201ENST00000603836 250 ntBASIC1.67□□□□□ -2.14
KRT28Q7Z3Y7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 MIR548A2-201ENST00000384956 97 ntBASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-504P-201ENST00000516568 104 ntBASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-861P-201ENST00000516745 106 ntBASIC1.66□□□□□ -2.14
KRT28Q7Z3Y7 RNU6-888P-201ENST00000363010 101 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 MIR548O-201ENST00000408583 114 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-693P-201ENST00000516134 107 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 MIR4431-201ENST00000579990 94 ntBASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-886P-201ENST00000384319 105 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 MIR548I3-201ENST00000408378 149 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 MIR548I1-201ENST00000408810 149 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 AC027119.1-201ENST00000440877 241 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 AC007751.1-201ENST00000529260 376 ntBASIC1.64□□□□□ -2.15
KRT28Q7Z3Y7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.63□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-978P-201ENST00000364371 103 ntBASIC1.63□□□□□ -2.15
KRT28Q7Z3Y7 RNU6-643P-201ENST00000384018 107 ntBASIC1.63□□□□□ -2.15
KRT28Q7Z3Y7 MIR758-201ENST00000390227 88 ntBASIC1.63□□□□□ -2.15
KRT28Q7Z3Y7 RNU4-57P-201ENST00000515980 135 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms