Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-95P-201ENST00000384697 107 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-291P-201ENST00000384720 107 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 MIR204-201ENST00000385200 110 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.03□□□□□ -2.57
USP54Q70EL1 AC040904.1-201ENST00000590850 223 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 AL356055.1-201ENST00000602528 446 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 AC124312.5-201ENST00000604451 268 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 SNORD116-11-201ENST00000383882 92 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 RNU6-708P-201ENST00000384217 107 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 RPS29P24-201ENST00000486345 171 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.04□□□□□ -2.58
USP54Q70EL1 MIR3915-201ENST00000578518 97 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 AC018638.8-201ENST00000588755 281 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 AC018462.2-201ENST00000605375 395 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 AC087752.4-201ENST00000605911 462 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.04□□□□□ -2.58
USP54Q70EL1 MRPS36P3-201ENST00000519284 130 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 AC024405.2-202ENST00000532731 184 ntBASIC-1.04□□□□□ -2.58
USP54Q70EL1 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 RNU6-702P-201ENST00000364982 107 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 SNORA1-201ENST00000384107 130 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 MTND2P39-201ENST00000457230 764 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 AC063944.3-201ENST00000609969 533 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 AC079248.2-201ENST00000623779 326 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 AC093726.3-201ENST00000637588 150 ntBASIC-1.05□□□□□ -2.58
USP54Q70EL1 RNU4-58P-201ENST00000363192 141 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 RNU6-626P-201ENST00000363354 107 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 MT-TH-201ENST00000387441 69 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 SNORD41.1-201ENST00000391000 69 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 RN7SKP19-201ENST00000516016 252 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 RNU6-693P-201ENST00000516134 107 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 RNU6-966P-201ENST00000516479 104 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 RNU7-25P-201ENST00000516544 62 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 MIR4528-201ENST00000577763 90 ntBASIC-1.06□□□□□ -2.58
USP54Q70EL1 U8.6-201ENST00000364939 135 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 SNORA72.6-201ENST00000384520 129 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 AC022140.2-201ENST00000623500 188 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 RNA5SP261-201ENST00000410536 106 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 USP9YP30-201ENST00000430729 455 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 CHEK2P4-201ENST00000450340 246 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 SNORD5.1-201ENST00000458800 75 ntBASIC-1.07□□□□□ -2.58
USP54Q70EL1 MIR302B-201ENST00000362188 73 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 MIR620-201ENST00000385232 95 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 AC096949.1-201ENST00000412047 152 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 AL353193.1-201ENST00000421444 268 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 RNU7-161P-201ENST00000517289 62 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 AC004223.4-201ENST00000612426 332 ntBASIC-1.08□□□□□ -2.58
USP54Q70EL1 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 RNU6-490P-201ENST00000362985 107 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.09□□□□□ -2.58
USP54Q70EL1 SNORA25.13-201ENST00000516395 103 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 SNORA25.16-201ENST00000516741 121 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 MIR378F-201ENST00000578143 78 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 AL080274.1-201ENST00000605565 220 ntBASIC-1.09□□□□□ -2.58
USP54Q70EL1 MIR365A-201ENST00000362260 87 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 MIR181B2-201ENST00000385004 89 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 MIR1278-201ENST00000408753 81 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 AC006210.1-201ENST00000424882 111 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 SNORD11.1-201ENST00000459482 85 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 AC021146.6-201ENST00000514659 117 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 RNU6-256P-201ENST00000516747 97 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 AC100767.1-201ENST00000528178 123 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 Z69908.1-201ENST00000622603 247 ntBASIC-1.1□□□□□ -2.58
USP54Q70EL1 RNU6-865P-201ENST00000364772 107 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 RNU6-584P-201ENST00000410350 95 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 AC244505.6-201ENST00000452829 130 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 SNORD11-201ENST00000459124 84 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 RNU7-149P-201ENST00000516739 59 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 DEFB131E-201ENST00000532329 154 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.1□□□□□ -2.59
USP54Q70EL1 DISC2.1-201ENST00000612827 205 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 AC022960.3-201ENST00000619794 441 ntBASIC-1.1□□□□□ -2.59
USP54Q70EL1 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 RNU4-20P-201ENST00000365601 151 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
USP54Q70EL1 MTCO3P40-201ENST00000392516 676 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 RNU4-55P-201ENST00000410731 137 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 AC074085.1-201ENST00000413598 418 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 AC083798.1-201ENST00000472671 131 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms