Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 snoU13.27-201ENST00000459278 104 ntBASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 SNORA74D-201ENST00000516404 141 ntBASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 RNA5SP481-201ENST00000516814 122 ntBASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 RNU7-35P-201ENST00000517174 62 ntBASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 RPL12P50-201ENST00000603116 116 ntBASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.43□□□□□ -2.02
CDPF1Q6NVV7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 RNU6-1163P-201ENST00000364516 107 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 MIR206-201ENST00000384872 86 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 MIR518A2-201ENST00000384966 87 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 SNORD88.1-201ENST00000408684 91 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 HMGN1P33-201ENST00000432945 451 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 RPS29P6-201ENST00000438196 145 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 AC099513.1-201ENST00000490423 301 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 AP006437.1-201ENST00000641440 3685 ntBASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CDPF1Q6NVV7 AC009487.2-201ENST00000420969 6821 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RNA5SP51-201ENST00000364750 119 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 Y_RNA.313-201ENST00000365095 103 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 Y_RNA.437-201ENST00000384113 113 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RNU6-342P-201ENST00000384521 104 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RNY1P4-201ENST00000384595 115 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 AC245047.7-201ENST00000440265 293 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RPL23AP6-201ENST00000446637 472 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 SNORA74.3-201ENST00000517108 154 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 ELOCP29-201ENST00000588193 334 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 RNU6-86P-201ENST00000606534 107 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 AC103810.7-201ENST00000607821 91 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 AP003355.3-201ENST00000623465 114 ntBASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDPF1Q6NVV7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CDPF1Q6NVV7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
CDPF1Q6NVV7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.4□□□□□ -2.02
CDPF1Q6NVV7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 MIR424-201ENST00000362227 98 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 SNORA38-201ENST00000363946 132 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 CST9LP2-201ENST00000437612 320 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 SCARNA13-201ENST00000516672 275 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 MIR8065-201ENST00000620577 100 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 Z97988.1-201ENST00000637697 135 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 AC017071.1-201ENST00000564407 2204 ntBASIC2.4□□□□□ -2.03
CDPF1Q6NVV7 MIR634-201ENST00000385208 97 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 HMGN2P39-201ENST00000398005 273 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 RNU6-857P-201ENST00000515893 110 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 FAM106DP-201ENST00000586416 501 ntBASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDPF1Q6NVV7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 Y_RNA.221-201ENST00000364248 96 ntBASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 RPS29P28-201ENST00000446439 141 ntBASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 RNU7-43P-201ENST00000516554 64 ntBASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 AC006160.2-201ENST00000637708 154 ntBASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.38□□□□□ -2.03
CDPF1Q6NVV7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 RNU6-509P-201ENST00000363519 107 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 RNU1-33P-201ENST00000364249 162 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 RNU6-24P-201ENST00000384440 107 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 MIR34C-201ENST00000384831 77 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 RN7SKP111-201ENST00000410349 271 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 Y_RNA.611-201ENST00000410682 108 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 AL162274.2-201ENST00000614406 332 ntBASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDPF1Q6NVV7 SNORD9-201ENST00000362566 104 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-633P-201ENST00000362612 103 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-1125P-201ENST00000363601 107 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-457P-201ENST00000363999 107 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 SNORA38.1-201ENST00000364172 131 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-1296P-201ENST00000383879 107 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNVU1-14-201ENST00000384770 164 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-447P-201ENST00000410293 104 ntBASIC2.36□□□□□ -2.03
CDPF1Q6NVV7 RNU6-1118P-201ENST00000410382 104 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms