Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTCRAQ6ISU1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PTCRAQ6ISU1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 MIR887-201ENST00000401258 79 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 MIR548G-201ENST00000408442 89 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-447P-201ENST00000410293 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1118P-201ENST00000410382 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1076P-201ENST00000410397 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-355P-201ENST00000410427 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-791P-201ENST00000410467 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-705P-201ENST00000410601 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1100P-201ENST00000410691 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1190P-201ENST00000410811 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-860P-201ENST00000410860 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1217P-201ENST00000411276 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 RNU6-785P-201ENST00000411324 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 HSPE1P9-201ENST00000440046 311 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 snoU13.26-201ENST00000459452 105 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 AC008413.1-201ENST00000511864 177 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 AC093729.1-201ENST00000513074 128 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 MIR4425-201ENST00000580572 84 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 MIR548AR-201ENST00000582191 57 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 U6.90-201ENST00000614007 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 U6.70-201ENST00000620287 104 ntBASIC3.18□□□□□ -1.9
PTCRAQ6ISU1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 RNU6-1031P-201ENST00000384773 107 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 ARF4P2-201ENST00000430209 526 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 AC087499.2-201ENST00000432861 149 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 snoU13.16-201ENST00000459350 104 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 AC079600.2-201ENST00000550076 130 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.17□□□□□ -1.9
PTCRAQ6ISU1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 RNU6-457P-201ENST00000363999 107 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 RNU6-865P-201ENST00000364772 107 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 SNORD38.2-201ENST00000384470 69 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 MIR519C-201ENST00000385053 87 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 AC245047.7-201ENST00000440265 293 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 SNORD123-201ENST00000459473 70 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 MIR8055-201ENST00000610739 97 ntBASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.16□□□□□ -1.9
PTCRAQ6ISU1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.9
PTCRAQ6ISU1 RNU1-109P-201ENST00000383960 147 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 MIR34C-201ENST00000384831 77 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 SNORD109B-201ENST00000458961 67 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 SNORD109A-201ENST00000459128 67 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 MIR5094-201ENST00000578766 85 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 MIR4712-201ENST00000583750 82 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 SEPT14P17-201ENST00000617978 177 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCRAQ6ISU1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 SNORD115-37-201ENST00000363768 82 ntBASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 RNU6-524P-201ENST00000384270 107 ntBASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCRAQ6ISU1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 SNORD115-3-201ENST00000363100 82 ntBASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 SNORD114-10-201ENST00000363409 72 ntBASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 RNU6-342P-201ENST00000384521 104 ntBASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.13□□□□□ -1.91
PTCRAQ6ISU1 Y_RNA.98-201ENST00000363109 102 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 Y_RNA.173-201ENST00000363776 113 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 RNU6-480P-201ENST00000384332 107 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 SNORD28B-201ENST00000390993 75 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 RPL31P63-201ENST00000422565 375 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 SPINT5P-201ENST00000448174 155 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 RNU1-98P-201ENST00000458992 160 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 AL513423.1-201ENST00000621695 132 ntBASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCRAQ6ISU1 SNORD115-27-201ENST00000364430 82 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 Y_RNA.448-201ENST00000384185 108 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 RNU6-1307P-201ENST00000391012 103 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 RNU6-613P-201ENST00000410412 108 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 RNU6-1086P-201ENST00000410930 100 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 RNU7-79P-201ENST00000516082 62 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 FAM106DP-201ENST00000586416 501 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 AC145423.2-201ENST00000610631 239 ntBASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms