Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR3121-201ENST00000579680 77 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR3683-201ENST00000580847 82 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MTND5P32-201ENST00000560711 1802 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP127-201ENST00000411051 133 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP168-201ENST00000516642 112 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 SNORA28-201ENST00000606769 126 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MIRLET7C-201ENST00000362160 84 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 MIR337-201ENST00000362281 93 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 SNORD18B-201ENST00000365659 72 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 MIR548A2-201ENST00000384956 97 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-360P-201ENST00000390944 104 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-126P-201ENST00000516685 103 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU7-28P-201ENST00000516759 62 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AC090049.2-201ENST00000550377 109 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-424P-201ENST00000384367 105 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 MIR624-201ENST00000385217 97 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-321P-201ENST00000410912 106 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AL158147.1-201ENST00000443970 75 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-888P-201ENST00000363010 101 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-414P-201ENST00000363705 104 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 U8.5-201ENST00000364528 136 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 SNORD77.3-201ENST00000391113 65 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 MIR891A-201ENST00000401237 79 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 AL603914.1-201ENST00000401964 204 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 PGBD4P5-201ENST00000445958 426 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 AC093850.1-201ENST00000454121 251 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-772P-201ENST00000516042 105 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR518F-201ENST00000384973 87 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORA40.5-201ENST00000391061 128 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AF228730.3-201ENST00000436691 102 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNRPGP13-201ENST00000442212 177 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC114811.1-201ENST00000507207 168 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORD45.4-201ENST00000516629 73 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC133485.4-201ENST00000561835 220 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC138907.4-201ENST00000570107 226 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR4762-201ENST00000585261 75 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR376A2-201ENST00000636782 80 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORD24-201ENST00000383884 75 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-163P-201ENST00000384396 106 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-429P-201ENST00000384582 108 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AL035461.1-201ENST00000421490 332 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AC005908.1-201ENST00000468701 347 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RN7SKP179-201ENST00000516126 217 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-781P-201ENST00000516377 101 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AC087685.1-201ENST00000587507 141 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 MIR6129-201ENST00000616087 109 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU6-268P-201ENST00000364174 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms