Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR3121-201ENST00000579680 77 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR3683-201ENST00000580847 82 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
SLC44A4Q53GD3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MTND5P32-201ENST00000560711 1802 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP127-201ENST00000411051 133 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP168-201ENST00000516642 112 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 SNORA28-201ENST00000606769 126 ntBASIC1.96□□□□□ -2.1
SLC44A4Q53GD3 MIRLET7C-201ENST00000362160 84 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 MIR337-201ENST00000362281 93 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 SNORD18B-201ENST00000365659 72 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 MIR548A2-201ENST00000384956 97 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-360P-201ENST00000390944 104 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU6-126P-201ENST00000516685 103 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 RNU7-28P-201ENST00000516759 62 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AC090049.2-201ENST00000550377 109 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
SLC44A4Q53GD3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-424P-201ENST00000384367 105 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 MIR624-201ENST00000385217 97 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-321P-201ENST00000410912 106 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AL158147.1-201ENST00000443970 75 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC44A4Q53GD3 RNU6-888P-201ENST00000363010 101 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-414P-201ENST00000363705 104 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 U8.5-201ENST00000364528 136 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 SNORD77.3-201ENST00000391113 65 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 MIR891A-201ENST00000401237 79 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 AL603914.1-201ENST00000401964 204 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 PGBD4P5-201ENST00000445958 426 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 AC093850.1-201ENST00000454121 251 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-772P-201ENST00000516042 105 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
SLC44A4Q53GD3 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR518F-201ENST00000384973 87 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORA40.5-201ENST00000391061 128 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AF228730.3-201ENST00000436691 102 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNRPGP13-201ENST00000442212 177 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC114811.1-201ENST00000507207 168 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORD45.4-201ENST00000516629 73 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC133485.4-201ENST00000561835 220 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AC138907.4-201ENST00000570107 226 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR4762-201ENST00000585261 75 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 MIR376A2-201ENST00000636782 80 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
SLC44A4Q53GD3 SNORD24-201ENST00000383884 75 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-163P-201ENST00000384396 106 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-429P-201ENST00000384582 108 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AL035461.1-201ENST00000421490 332 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AC005908.1-201ENST00000468701 347 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RN7SKP179-201ENST00000516126 217 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-781P-201ENST00000516377 101 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 AC087685.1-201ENST00000587507 141 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 MIR6129-201ENST00000616087 109 ntBASIC1.91□□□□□ -2.1
SLC44A4Q53GD3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU6-268P-201ENST00000364174 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms