Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 AC130289.1-201ENST00000577321 73 ntBASIC1.52□□□□□ -2.17
TRIM60Q495X7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM60Q495X7 SNORD45.3-201ENST00000363836 72 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 Y_RNA.257-201ENST00000364596 102 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 MIR520C-201ENST00000385005 87 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRIM60Q495X7 Y_RNA.793-201ENST00000411222 111 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 AL138752.1-201ENST00000452964 351 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 SNORA74.3-201ENST00000517108 154 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
TRIM60Q495X7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
TRIM60Q495X7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM60Q495X7 SNORA1.2-201ENST00000365189 134 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 RNU6-578P-201ENST00000390980 103 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 SNORD123-201ENST00000459473 70 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 RNA5SP153-201ENST00000516498 76 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 MIR4308-201ENST00000580634 81 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
TRIM60Q495X7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM60Q495X7 SNORD41-201ENST00000386967 70 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 SNRPGP8-201ENST00000454064 226 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 RNU7-25P-201ENST00000516544 62 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 RNU7-43P-201ENST00000516554 64 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 AC109810.1-201ENST00000534066 224 ntBASIC1.49□□□□□ -2.17
TRIM60Q495X7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRIM60Q495X7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM60Q495X7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 U8.17-201ENST00000391292 132 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 Y_RNA.644-201ENST00000459006 113 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 AC107297.1-201ENST00000459991 176 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 RNU6-830P-201ENST00000516353 107 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 Y_RNA.674-201ENST00000516362 113 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 RNU6-197P-201ENST00000516680 100 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 AC108706.1-201ENST00000611053 297 ntBASIC1.48□□□□□ -2.17
TRIM60Q495X7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM60Q495X7 RNU6-200P-201ENST00000364743 107 ntBASIC1.47□□□□□ -2.17
TRIM60Q495X7 RNU6-484P-201ENST00000384016 107 ntBASIC1.47□□□□□ -2.17
TRIM60Q495X7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.47□□□□□ -2.17
TRIM60Q495X7 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
TRIM60Q495X7 AC090425.1-201ENST00000610007 140 ntBASIC1.47□□□□□ -2.17
TRIM60Q495X7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM60Q495X7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
TRIM60Q495X7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 SNORD115-28-201ENST00000363931 81 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM60Q495X7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.46□□□□□ -2.18
TRIM60Q495X7 RNU6-138P-201ENST00000515952 107 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 RNU6-561P-201ENST00000516222 102 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 RNU7-181P-201ENST00000517234 74 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 AP002392.1-201ENST00000537692 208 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 MIR4764-201ENST00000580680 88 ntBASIC1.46□□□□□ -2.18
TRIM60Q495X7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM60Q495X7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 RNU6-47P-201ENST00000383866 107 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 SNORD61-201ENST00000384252 73 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 RNU6-918P-201ENST00000391219 106 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM60Q495X7 MTND5P15-201ENST00000434246 349 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM60Q495X7 MIR6767-201ENST00000637302 66 ntBASIC1.45□□□□□ -2.18
TRIM60Q495X7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 RNU6-275P-201ENST00000364910 107 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 MIR598-201ENST00000384868 97 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRIM60Q495X7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.44□□□□□ -2.18
TRIM60Q495X7 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 AC072026.1-201ENST00000605023 201 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 MIR6788-201ENST00000618842 66 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 AC134878.1-201ENST00000619901 243 ntBASIC1.44□□□□□ -2.18
TRIM60Q495X7 Y_RNA.29-201ENST00000362570 113 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 RNU6-888P-201ENST00000363010 101 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 MIR548J-201ENST00000408833 112 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 RNU4-43P-201ENST00000410628 137 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM60Q495X7 AC087499.4-201ENST00000448505 178 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 SNORD116-25-201ENST00000516517 92 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 MIR548AR-201ENST00000582191 57 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.43□□□□□ -2.18
TRIM60Q495X7 U6.106-201ENST00000636360 105 ntBASIC1.43□□□□□ -2.18
TRIM60Q495X7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRIM60Q495X7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.42□□□□□ -2.18
TRIM60Q495X7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.42□□□□□ -2.18
TRIM60Q495X7 RNA5SP48-201ENST00000363969 126 ntBASIC1.42□□□□□ -2.18
TRIM60Q495X7 RNU6-1318P-201ENST00000365389 103 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms