Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP46P62068 Y_RNA.191-201ENST00000363972 113 ntBASIC3.24□□□□□ -1.89
USP46P62068 RNU6-342P-201ENST00000384521 104 ntBASIC3.24□□□□□ -1.89
USP46P62068 MIR526A1-201ENST00000384897 85 ntBASIC3.24□□□□□ -1.89
USP46P62068 HMGN2P3-201ENST00000433603 273 ntBASIC3.24□□□□□ -1.89
USP46P62068 HMGN2P5-201ENST00000436882 273 ntBASIC3.24□□□□□ -1.89
USP46P62068 AC245047.7-201ENST00000440265 293 ntBASIC3.24□□□□□ -1.89
USP46P62068 RN7SL75P-201ENST00000461926 281 ntBASIC3.24□□□□□ -1.89
USP46P62068 UBL5P1-201ENST00000507979 193 ntBASIC3.24□□□□□ -1.89
USP46P62068 AC021506.2-201ENST00000612354 169 ntBASIC3.24□□□□□ -1.89
USP46P62068 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
USP46P62068 RNU1-148P-201ENST00000384472 162 ntBASIC3.23□□□□□ -1.89
USP46P62068 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
USP46P62068 Z96811.1-201ENST00000445880 108 ntBASIC3.23□□□□□ -1.89
USP46P62068 RPS29P28-201ENST00000446439 141 ntBASIC3.23□□□□□ -1.89
USP46P62068 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.23□□□□□ -1.89
USP46P62068 RNU6-826P-201ENST00000516827 104 ntBASIC3.23□□□□□ -1.89
USP46P62068 RNA5SP437-201ENST00000517249 129 ntBASIC3.23□□□□□ -1.89
USP46P62068 EIF4BP1-201ENST00000554881 351 ntBASIC3.23□□□□□ -1.89
USP46P62068 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP46P62068 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
USP46P62068 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.22□□□□□ -1.89
USP46P62068 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP46P62068 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP46P62068 MIR206-201ENST00000384872 86 ntBASIC3.22□□□□□ -1.89
USP46P62068 RNU6-279P-201ENST00000391297 101 ntBASIC3.22□□□□□ -1.89
USP46P62068 RNU6-857P-201ENST00000515893 110 ntBASIC3.22□□□□□ -1.89
USP46P62068 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
USP46P62068 FAM106DP-201ENST00000586416 501 ntBASIC3.22□□□□□ -1.89
USP46P62068 AL033523.1-201ENST00000605153 153 ntBASIC3.22□□□□□ -1.89
USP46P62068 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
USP46P62068 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
USP46P62068 AC073325.2-201ENST00000339545 159 ntBASIC3.21□□□□□ -1.9
USP46P62068 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
USP46P62068 Y_RNA.4-201ENST00000362333 112 ntBASIC3.21□□□□□ -1.9
USP46P62068 SNORA38-201ENST00000363946 132 ntBASIC3.21□□□□□ -1.9
USP46P62068 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
USP46P62068 MIR660-201ENST00000385235 97 ntBASIC3.21□□□□□ -1.9
USP46P62068 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
USP46P62068 RPL23AP6-201ENST00000446637 472 ntBASIC3.21□□□□□ -1.9
USP46P62068 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.21□□□□□ -1.9
USP46P62068 AL513423.1-201ENST00000621695 132 ntBASIC3.21□□□□□ -1.9
USP46P62068 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
USP46P62068 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP46P62068 AC005336.3-201ENST00000623833 2679 ntBASIC3.2□□□□□ -1.9
USP46P62068 Y_RNA.140-201ENST00000363474 103 ntBASIC3.2□□□□□ -1.9
USP46P62068 SNORD38.1-201ENST00000363863 68 ntBASIC3.2□□□□□ -1.9
USP46P62068 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
USP46P62068 Y_RNA.537-201ENST00000384626 109 ntBASIC3.2□□□□□ -1.9
USP46P62068 MIR634-201ENST00000385208 97 ntBASIC3.2□□□□□ -1.9
USP46P62068 RNU6-1307P-201ENST00000391012 103 ntBASIC3.2□□□□□ -1.9
USP46P62068 MIR1283-2-201ENST00000408621 87 ntBASIC3.2□□□□□ -1.9
USP46P62068 AC006386.2-201ENST00000624491 75 ntBASIC3.2□□□□□ -1.9
USP46P62068 AC012005.1-201ENST00000624575 75 ntBASIC3.2□□□□□ -1.9
USP46P62068 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP46P62068 RNU6-1163P-201ENST00000364516 107 ntBASIC3.19□□□□□ -1.9
USP46P62068 MIR34C-201ENST00000384831 77 ntBASIC3.19□□□□□ -1.9
USP46P62068 Y_RNA.609-201ENST00000410669 89 ntBASIC3.19□□□□□ -1.9
USP46P62068 RNU6-1086P-201ENST00000410930 100 ntBASIC3.19□□□□□ -1.9
USP46P62068 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
USP46P62068 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
USP46P62068 snoU13.16-201ENST00000459350 104 ntBASIC3.19□□□□□ -1.9
USP46P62068 RNA5SP137-201ENST00000516833 135 ntBASIC3.19□□□□□ -1.9
USP46P62068 RPL12P50-201ENST00000603116 116 ntBASIC3.19□□□□□ -1.9
USP46P62068 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP46P62068 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
USP46P62068 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP46P62068 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP46P62068 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP46P62068 RNU6-865P-201ENST00000364772 107 ntBASIC3.18□□□□□ -1.9
USP46P62068 RNA5SP465-201ENST00000391195 109 ntBASIC3.18□□□□□ -1.9
USP46P62068 snoU13.27-201ENST00000459278 104 ntBASIC3.18□□□□□ -1.9
USP46P62068 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
USP46P62068 RNU6-1006P-201ENST00000516998 103 ntBASIC3.18□□□□□ -1.9
USP46P62068 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
USP46P62068 SEPT14P17-201ENST00000617978 177 ntBASIC3.18□□□□□ -1.9
USP46P62068 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
USP46P62068 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP46P62068 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
USP46P62068 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
USP46P62068 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP46P62068 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP46P62068 Y_RNA.448-201ENST00000384185 108 ntBASIC3.17□□□□□ -1.9
USP46P62068 MIR518A2-201ENST00000384966 87 ntBASIC3.17□□□□□ -1.9
USP46P62068 UBBP3-201ENST00000445497 241 ntBASIC3.17□□□□□ -1.9
USP46P62068 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
USP46P62068 MIR548BB-201ENST00000626714 66 ntBASIC3.17□□□□□ -1.9
USP46P62068 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
USP46P62068 AC006160.2-201ENST00000637708 154 ntBASIC3.17□□□□□ -1.9
USP46P62068 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.16□□□□□ -1.9
USP46P62068 RNU6-509P-201ENST00000363519 107 ntBASIC3.16□□□□□ -1.9
USP46P62068 SNORA80A-201ENST00000363922 136 ntBASIC3.16□□□□□ -1.9
USP46P62068 Y_RNA.354-201ENST00000365448 111 ntBASIC3.16□□□□□ -1.9
USP46P62068 RNU6-652P-201ENST00000365488 107 ntBASIC3.16□□□□□ -1.9
USP46P62068 SNORA11.2-201ENST00000408318 127 ntBASIC3.16□□□□□ -1.9
USP46P62068 AL445685.2-201ENST00000422551 342 ntBASIC3.16□□□□□ -1.9
USP46P62068 SNORD67.1-201ENST00000516618 108 ntBASIC3.16□□□□□ -1.9
USP46P62068 RNU7-35P-201ENST00000517174 62 ntBASIC3.16□□□□□ -1.9
USP46P62068 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.16□□□□□ -1.9
USP46P62068 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms