Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 SNORA1-201ENST00000384107 130 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 SNORA72.4-201ENST00000384174 132 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 MIR548A2-201ENST00000384956 97 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 RPS3AP52-201ENST00000435639 297 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 RNU7-45P-201ENST00000459460 63 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 MIR4423-201ENST00000580922 80 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 TPTEP1-208ENST00000636884 213 ntBASIC-0.78□□□□□ -2.53
HIST1H2BDP58876 MIR330-201ENST00000362196 94 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 RNU6-949P-201ENST00000384040 107 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 MIR548K-201ENST00000408406 116 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 AC244250.2-201ENST00000418731 148 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 snoU13.18-201ENST00000459483 104 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 RNU6-307P-201ENST00000516743 106 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 MIR3145-201ENST00000580727 82 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 AC084368.1-201ENST00000620935 65 ntBASIC-0.79□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 RNU6-801P-201ENST00000364087 105 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 AC114755.3-201ENST00000481111 251 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 RN7SKP299-201ENST00000606679 301 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 AL021707.8-201ENST00000609428 183 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 AL590491.3-201ENST00000610731 82 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 MIR6507-201ENST00000613630 70 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 AC073869.9-201ENST00000641610 120 ntBASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.8□□□□□ -2.54
HIST1H2BDP58876 SNORD114-11-201ENST00000363738 75 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 MIR548F5-201ENST00000408421 86 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 HMGN2P22-201ENST00000427588 175 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 AL160004.2-201ENST00000432935 350 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 AL049861.1-201ENST00000603130 150 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 MIR548AZ-201ENST00000616567 95 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 PISRT1.1-201ENST00000616930 107 ntBASIC-0.81□□□□□ -2.54
HIST1H2BDP58876 MIR101-2-201ENST00000362195 79 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 RNA5SP205-201ENST00000364653 136 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 SNORD24-201ENST00000383884 75 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 SNORD61-201ENST00000384252 73 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 RNU6-480P-201ENST00000384332 107 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 SNORA32.3-201ENST00000384772 121 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 RNA5SP261-201ENST00000410536 106 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 RNU7-161P-201ENST00000517289 62 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 AL078603.1-201ENST00000603824 313 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 AL360085.1-201ENST00000604713 532 ntBASIC-0.82□□□□□ -2.54
HIST1H2BDP58876 MIR342-201ENST00000362212 99 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 MTATP6P17-201ENST00000431030 672 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 AF228730.3-201ENST00000436691 102 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 AC244505.6-201ENST00000452829 130 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 RNU7-169P-201ENST00000459456 61 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 RNU6-120P-201ENST00000516077 103 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 AC144568.1-201ENST00000520139 137 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 AC109635.3-201ENST00000529536 185 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 NAMPTP3-201ENST00000569273 224 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 MIR4662B-201ENST00000579498 81 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 MIR4645-201ENST00000583158 77 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 U6.92-201ENST00000636464 89 ntBASIC-0.83□□□□□ -2.54
HIST1H2BDP58876 MIR302B-201ENST00000362188 73 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNY3P11-201ENST00000364153 102 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNU6-308P-201ENST00000390957 107 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 SNORD41.1-201ENST00000391000 69 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 SNORD110-201ENST00000408189 75 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNU7-104P-201ENST00000459398 79 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RPS29P25-201ENST00000481709 171 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 SNORD77.4-201ENST00000516158 81 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNU6-531P-201ENST00000516694 104 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 RNU7-4P-201ENST00000516961 62 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 MIR4432-201ENST00000581823 84 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 AC015540.1-201ENST00000615828 501 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 AC099654.14-201ENST00000638599 341 ntBASIC-0.84□□□□□ -2.54
HIST1H2BDP58876 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 RNU6-888P-201ENST00000363010 101 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 SNORD114-28-201ENST00000363610 72 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 RNU6-702P-201ENST00000364982 107 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 RNU6-383P-201ENST00000410864 94 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 MTND1P1-201ENST00000445453 368 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 AC100767.1-201ENST00000528178 123 ntBASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.85□□□□□ -2.55
HIST1H2BDP58876 SNORA25.7-201ENST00000364375 127 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 RNU6-144P-201ENST00000383951 107 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 AC006210.1-201ENST00000424882 111 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 BX276092.1-201ENST00000427368 251 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.86□□□□□ -2.55
HIST1H2BDP58876 RNA5SP220-201ENST00000516298 104 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms