Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORD115-15-201ENST00000364809 81 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 RNU1-133P-201ENST00000364867 167 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-1-201ENST00000364961 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-26-201ENST00000365067 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-10-201ENST00000365073 81 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORA1.2-201ENST00000365189 134 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-43-201ENST00000365503 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 Y_RNA.370-201ENST00000365589 108 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-36-201ENST00000365629 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 RNA5SP425-201ENST00000410336 112 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 Y_RNA.630-201ENST00000411370 108 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 AL161935.2-201ENST00000414627 60 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLRN1P58418 RNU7-80P-201ENST00000459562 61 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 RNU6-917P-201ENST00000516294 104 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 RNU6-781P-201ENST00000516377 101 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 IGKV1-22-201ENST00000524313 326 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 MIR548AR-201ENST00000582191 57 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 SNORD115-40-201ENST00000606510 82 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 AC091932.4-201ENST00000623386 200 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 AL596211.1-201ENST00000569873 2277 ntBASIC1.85□□□□□ -2.11
CLRN1P58418 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLRN1P58418 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 SNORD58C-201ENST00000365223 64 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 Y_RNA.563-201ENST00000384707 108 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 SNORD28B-201ENST00000390993 75 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 Y_RNA.629-201ENST00000411368 105 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 RPS29P24-201ENST00000486345 171 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 RNU6-240P-201ENST00000516098 97 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 AC064859.1-201ENST00000624741 174 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 MIR3914-2-201ENST00000637339 95 ntBASIC1.84□□□□□ -2.11
CLRN1P58418 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.12
CLRN1P58418 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
CLRN1P58418 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.83□□□□□ -2.12
CLRN1P58418 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLRN1P58418 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CLRN1P58418 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.83□□□□□ -2.12
CLRN1P58418 RNU6-349P-201ENST00000362402 107 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 Y_RNA.366-201ENST00000365540 102 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 SNORA70B-201ENST00000384210 135 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 Y_RNA.454-201ENST00000384224 113 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 Z98742.3-201ENST00000418637 326 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 AC107297.1-201ENST00000459991 176 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 RNU6-998P-201ENST00000515894 101 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 AL137067.1-201ENST00000615933 120 ntBASIC1.83□□□□□ -2.12
CLRN1P58418 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 RNU6-690P-201ENST00000365242 106 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 RNA5SP259-201ENST00000365541 109 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 MIR513A1-201ENST00000385138 129 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLRN1P58418 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 RNU7-96P-201ENST00000459535 64 ntBASIC1.82□□□□□ -2.12
CLRN1P58418 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CLRN1P58418 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.81□□□□□ -2.12
CLRN1P58418 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLRN1P58418 Y_RNA.273-201ENST00000364703 102 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 RNY1P6-201ENST00000384193 109 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 SNORA64-201ENST00000384674 134 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 MIR570-201ENST00000384917 97 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 MIR1263-201ENST00000408324 86 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 RNU2-11P-201ENST00000459191 187 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 SNORA74.3-201ENST00000517108 154 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 MIR3945-201ENST00000581853 98 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 AC104984.5-201ENST00000586878 94 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 HSPE1P19-201ENST00000603327 295 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.81□□□□□ -2.12
CLRN1P58418 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
CLRN1P58418 MIR302B-201ENST00000362188 73 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 Y_RNA.353-201ENST00000365440 108 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 MIRLET7F2-201ENST00000385277 83 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 RN7SKP223-201ENST00000410582 62 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 AL035398.1-201ENST00000430869 322 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 RNU7-67P-201ENST00000459003 62 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 UBL5P3-201ENST00000475112 231 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 RNU2-13P-201ENST00000515909 113 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 SNORA31.4-201ENST00000516049 129 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 RNU6-958P-201ENST00000516995 106 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.8□□□□□ -2.12
CLRN1P58418 AC025166.1-201ENST00000612411 163 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
CLRN1P58418 SNORA67.3-201ENST00000384366 140 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 MIR653-201ENST00000385279 96 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 AL023284.1-201ENST00000403956 276 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 534.2 ms