Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR15B-201ENST00000385045 98 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 RNU4-43P-201ENST00000410628 137 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 RNU4-57P-201ENST00000515980 135 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 RNU7-25P-201ENST00000516544 62 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
HDAC4P56524 Y_RNA.75-201ENST00000362927 97 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU6-682P-201ENST00000363843 106 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU6-275P-201ENST00000364910 107 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 Y_RNA.432-201ENST00000384087 111 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 SNORD61-201ENST00000384252 73 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU4-70P-201ENST00000384579 139 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 Y_RNA.547-201ENST00000384654 119 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 MIR518F-201ENST00000384973 87 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU6-1299P-201ENST00000516316 100 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU6-830P-201ENST00000516353 107 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 SNORA81.3-201ENST00000517283 198 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 MIR4662B-201ENST00000579498 81 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
HDAC4P56524 Y_RNA.23-201ENST00000362496 106 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 SNORD38C-201ENST00000384381 69 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 MIR136-201ENST00000385207 82 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 MIR548O-201ENST00000408583 114 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 AL138752.1-201ENST00000452964 351 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 RNU7-120P-201ENST00000459334 63 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 Y_RNA.797-201ENST00000515977 94 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 RNA5SP153-201ENST00000516498 76 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 Y_RNA.700-201ENST00000516806 100 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 AP002392.1-201ENST00000537692 208 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 AL357312.1-201ENST00000603879 298 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 AC004792.1-201ENST00000614523 137 ntBASIC1.42□□□□□ -2.18
HDAC4P56524 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HDAC4P56524 RNU6-888P-201ENST00000363010 101 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 RNU6-728P-201ENST00000365375 104 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 SNORD28B-201ENST00000390993 75 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 Y_RNA.793-201ENST00000411222 111 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 MTND5P15-201ENST00000434246 349 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 RNU6-197P-201ENST00000516680 100 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 MRPS18CP4-201ENST00000535821 231 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 GHRLOS.1-201ENST00000610995 70 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 MIR6779-201ENST00000617283 64 ntBASIC1.41□□□□□ -2.18
HDAC4P56524 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HDAC4P56524 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 Y_RNA.29-201ENST00000362570 113 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 SNORD24-201ENST00000383884 75 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU6-907P-201ENST00000390924 102 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU6-938P-201ENST00000411285 103 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU2-64P-201ENST00000411315 191 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 AL121914.1-201ENST00000450188 156 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 SNORD123-201ENST00000459473 70 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU6-861P-201ENST00000516745 106 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 SNORA18.7-201ENST00000516910 131 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 RNU6-365P-201ENST00000517113 106 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 AC072026.1-201ENST00000605023 201 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 AC015726.2-201ENST00000620112 122 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
HDAC4P56524 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
HDAC4P56524 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HDAC4P56524 RNA5SP325-201ENST00000363756 130 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 RNU6-978P-201ENST00000364371 103 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HDAC4P56524 RNU2-70P-201ENST00000410718 179 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 RNU5E-9P-201ENST00000411164 104 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.39□□□□□ -2.19
HDAC4P56524 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 RNU6-1270P-201ENST00000517128 108 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 MIR548AR-201ENST00000582191 57 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 MIR6515-201ENST00000619843 57 ntBASIC1.39□□□□□ -2.19
HDAC4P56524 Y_RNA.36-201ENST00000362602 112 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 SNORA1-201ENST00000384107 130 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 Y_RNA.494-201ENST00000384432 111 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.38□□□□□ -2.19
HDAC4P56524 AC004223.1-201ENST00000479840 271 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AC074198.2-201ENST00000508153 258 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 RNU6-693P-201ENST00000516134 107 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 RNU6-126P-201ENST00000516685 103 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 RNU7-181P-201ENST00000517234 74 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AC022709.1-201ENST00000615967 87 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
HDAC4P56524 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 282.7 ms