Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-613P-201ENST00000410412 108 ntBASIC0.94□□□□□ -2.26
CDH13P55290 RNU6-651P-201ENST00000411040 105 ntBASIC0.94□□□□□ -2.26
CDH13P55290 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
CDH13P55290 RNU6-1299P-201ENST00000516316 100 ntBASIC0.94□□□□□ -2.26
CDH13P55290 RNA5SP153-201ENST00000516498 76 ntBASIC0.94□□□□□ -2.26
CDH13P55290 MIR4781-201ENST00000585250 76 ntBASIC0.94□□□□□ -2.26
CDH13P55290 AL360085.1-201ENST00000604713 532 ntBASIC0.94□□□□□ -2.26
CDH13P55290 MIR6516-201ENST00000630554 81 ntBASIC0.94□□□□□ -2.26
CDH13P55290 RNU6-888P-201ENST00000363010 101 ntBASIC0.93□□□□□ -2.26
CDH13P55290 Y_RNA.396-201ENST00000383949 103 ntBASIC0.93□□□□□ -2.26
CDH13P55290 RNU6-1228P-201ENST00000391014 107 ntBASIC0.93□□□□□ -2.26
CDH13P55290 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
CDH13P55290 SNORD111-201ENST00000408139 94 ntBASIC0.93□□□□□ -2.26
CDH13P55290 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
CDH13P55290 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
CDH13P55290 RNU6-693P-201ENST00000516134 107 ntBASIC0.93□□□□□ -2.26
CDH13P55290 AC012433.1-201ENST00000588916 398 ntBASIC0.93□□□□□ -2.26
CDH13P55290 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
CDH13P55290 AC106800.4-201ENST00000614905 153 ntBASIC0.93□□□□□ -2.26
CDH13P55290 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CDH13P55290 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.93□□□□□ -2.26
CDH13P55290 Y_RNA.288-201ENST00000364854 92 ntBASIC0.92□□□□□ -2.26
CDH13P55290 RNU6-484P-201ENST00000384016 107 ntBASIC0.92□□□□□ -2.26
CDH13P55290 SNORD61-201ENST00000384252 73 ntBASIC0.92□□□□□ -2.26
CDH13P55290 MIR518F-201ENST00000384973 87 ntBASIC0.92□□□□□ -2.26
CDH13P55290 SNORA40.5-201ENST00000391061 128 ntBASIC0.92□□□□□ -2.26
CDH13P55290 MIR548H3-201ENST00000408771 118 ntBASIC0.92□□□□□ -2.26
CDH13P55290 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.92□□□□□ -2.26
CDH13P55290 SNORD127-201ENST00000458892 86 ntBASIC0.92□□□□□ -2.26
CDH13P55290 RNU6-327P-201ENST00000516270 127 ntBASIC0.92□□□□□ -2.26
CDH13P55290 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.92□□□□□ -2.26
CDH13P55290 AC036111.3-201ENST00000526389 112 ntBASIC0.92□□□□□ -2.26
CDH13P55290 AC097639.2-201ENST00000603159 172 ntBASIC0.92□□□□□ -2.26
CDH13P55290 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.92□□□□□ -2.26
CDH13P55290 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
CDH13P55290 AC134878.1-201ENST00000619901 243 ntBASIC0.92□□□□□ -2.26
CDH13P55290 AL365265.1-201ENST00000621045 234 ntBASIC0.92□□□□□ -2.26
CDH13P55290 Y_RNA.37-201ENST00000362606 108 ntBASIC0.91□□□□□ -2.26
CDH13P55290 RNU6-1309P-201ENST00000363305 108 ntBASIC0.91□□□□□ -2.26
CDH13P55290 Y_RNA.133-201ENST00000363428 110 ntBASIC0.91□□□□□ -2.26
CDH13P55290 Y_RNA.241-201ENST00000364470 117 ntBASIC0.91□□□□□ -2.26
CDH13P55290 SNORD113.3-201ENST00000364630 78 ntBASIC0.91□□□□□ -2.26
CDH13P55290 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
CDH13P55290 Y_RNA.432-201ENST00000384087 111 ntBASIC0.91□□□□□ -2.26
CDH13P55290 MIR548A2-201ENST00000384956 97 ntBASIC0.91□□□□□ -2.26
CDH13P55290 MT-TN-201ENST00000387400 73 ntBASIC0.91□□□□□ -2.26
CDH13P55290 MTCYBP9-201ENST00000431021 303 ntBASIC0.91□□□□□ -2.26
CDH13P55290 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
CDH13P55290 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
CDH13P55290 MIR548AO-201ENST00000579992 96 ntBASIC0.91□□□□□ -2.26
CDH13P55290 AP000942.4-201ENST00000604811 241 ntBASIC0.91□□□□□ -2.26
CDH13P55290 Y_RNA.66-201ENST00000362862 102 ntBASIC0.9□□□□□ -2.27
CDH13P55290 RNU6-653P-201ENST00000363074 106 ntBASIC0.9□□□□□ -2.27
CDH13P55290 snoU2_19.4-201ENST00000364329 80 ntBASIC0.9□□□□□ -2.27
CDH13P55290 Y_RNA.262-201ENST00000364641 102 ntBASIC0.9□□□□□ -2.27
CDH13P55290 Y_RNA.634-201ENST00000364811 113 ntBASIC0.9□□□□□ -2.27
CDH13P55290 Y_RNA.562-201ENST00000384695 113 ntBASIC0.9□□□□□ -2.27
CDH13P55290 RNU6-381P-201ENST00000391259 108 ntBASIC0.9□□□□□ -2.27
CDH13P55290 MIR1302-3-201ENST00000408128 138 ntBASIC0.9□□□□□ -2.27
CDH13P55290 RNU2-70P-201ENST00000410718 179 ntBASIC0.9□□□□□ -2.27
CDH13P55290 RNU6-938P-201ENST00000411285 103 ntBASIC0.9□□□□□ -2.27
CDH13P55290 SNRPGP8-201ENST00000454064 226 ntBASIC0.9□□□□□ -2.27
CDH13P55290 RNU6-1045P-201ENST00000516321 107 ntBASIC0.9□□□□□ -2.27
CDH13P55290 AP003484.1-201ENST00000530974 250 ntBASIC0.9□□□□□ -2.27
CDH13P55290 AC023827.1-201ENST00000569247 97 ntBASIC0.9□□□□□ -2.27
CDH13P55290 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
CDH13P55290 AL442067.1-201ENST00000613261 223 ntBASIC0.9□□□□□ -2.27
CDH13P55290 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.89□□□□□ -2.27
CDH13P55290 MIR377-201ENST00000362145 69 ntBASIC0.89□□□□□ -2.27
CDH13P55290 Y_RNA.162-201ENST00000363683 102 ntBASIC0.89□□□□□ -2.27
CDH13P55290 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
CDH13P55290 RNU4-17P-201ENST00000365598 141 ntBASIC0.89□□□□□ -2.27
CDH13P55290 Y_RNA.410-201ENST00000383992 113 ntBASIC0.89□□□□□ -2.27
CDH13P55290 MT-TT-201ENST00000387460 66 ntBASIC0.89□□□□□ -2.27
CDH13P55290 AL606845.1-201ENST00000404881 255 ntBASIC0.89□□□□□ -2.27
CDH13P55290 MTND2P23-201ENST00000422990 651 ntBASIC0.89□□□□□ -2.27
CDH13P55290 RNU7-73P-201ENST00000458743 63 ntBASIC0.89□□□□□ -2.27
CDH13P55290 U7.7-201ENST00000459276 60 ntBASIC0.89□□□□□ -2.27
CDH13P55290 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
CDH13P55290 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
CDH13P55290 Y_RNA.4-201ENST00000362333 112 ntBASIC0.88□□□□□ -2.27
CDH13P55290 RNU6-103P-201ENST00000363686 107 ntBASIC0.88□□□□□ -2.27
CDH13P55290 RNU6-654P-201ENST00000364373 107 ntBASIC0.88□□□□□ -2.27
CDH13P55290 Y_RNA.494-201ENST00000384432 111 ntBASIC0.88□□□□□ -2.27
CDH13P55290 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH13P55290 RNU7-67P-201ENST00000459003 62 ntBASIC0.88□□□□□ -2.27
CDH13P55290 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH13P55290 SCARNA15.1-201ENST00000516384 125 ntBASIC0.88□□□□□ -2.27
CDH13P55290 SNORA18.4-201ENST00000516440 124 ntBASIC0.88□□□□□ -2.27
CDH13P55290 MIR4643-201ENST00000577473 78 ntBASIC0.88□□□□□ -2.27
CDH13P55290 AC011921.3-201ENST00000605540 361 ntBASIC0.88□□□□□ -2.27
CDH13P55290 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CDH13P55290 Y_RNA.277-201ENST00000364754 102 ntBASIC0.87□□□□□ -2.27
CDH13P55290 Y_RNA.416-201ENST00000384014 113 ntBASIC0.87□□□□□ -2.27
CDH13P55290 SNORA27-201ENST00000384323 126 ntBASIC0.87□□□□□ -2.27
CDH13P55290 RNU2-38P-201ENST00000410856 79 ntBASIC0.87□□□□□ -2.27
CDH13P55290 RPS3AP1-201ENST00000413190 320 ntBASIC0.87□□□□□ -2.27
CDH13P55290 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
CDH13P55290 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
CDH13P55290 RNU6-453P-201ENST00000516819 85 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms