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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
RNU6-613P-201
ENST00000410412
108 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
RNU6-651P-201
ENST00000411040
105 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
POLR2J4-204
ENST00000418424
324 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
RNU6-1299P-201
ENST00000516316
100 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
RNA5SP153-201
ENST00000516498
76 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
MIR4781-201
ENST00000585250
76 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
AL360085.1-201
ENST00000604713
532 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
MIR6516-201
ENST00000630554
81 nt
BASIC
0.94
□□□□□ -2.26
CDH13
P55290
RNU6-888P-201
ENST00000363010
101 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
Y_RNA.396-201
ENST00000383949
103 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
RNU6-1228P-201
ENST00000391014
107 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
MIR942-201
ENST00000401111
86 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
SNORD111-201
ENST00000408139
94 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
snoU13.16-201
ENST00000459350
104 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
PDCD5P2-201
ENST00000507570
312 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
RNU6-693P-201
ENST00000516134
107 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
AC012433.1-201
ENST00000588916
398 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
AL020996.3-201
ENST00000606617
222 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
AC106800.4-201
ENST00000614905
153 nt
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
ANGPTL3-201
ENST00000371129
2805 nt
APPRIS P1
TSL 1 (best)
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
CEP57L1-213
ENST00000520883
2055 nt
TSL 5
BASIC
0.93
□□□□□ -2.26
CDH13
P55290
Y_RNA.288-201
ENST00000364854
92 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
RNU6-484P-201
ENST00000384016
107 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
SNORD61-201
ENST00000384252
73 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
MIR518F-201
ENST00000384973
87 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
SNORA40.5-201
ENST00000391061
128 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
MIR548H3-201
ENST00000408771
118 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AL353742.1-201
ENST00000453455
224 nt
TSL 3
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
SNORD127-201
ENST00000458892
86 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
RNU6-327P-201
ENST00000516270
127 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AC090155.2-201
ENST00000518854
267 nt
TSL 3
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AC036111.3-201
ENST00000526389
112 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AC097639.2-201
ENST00000603159
172 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
TTC28-AS1_2.1-201
ENST00000611117
157 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
ZFAT-AS1_2.1-201
ENST00000613742
201 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AC134878.1-201
ENST00000619901
243 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
AL365265.1-201
ENST00000621045
234 nt
BASIC
0.92
□□□□□ -2.26
CDH13
P55290
Y_RNA.37-201
ENST00000362606
108 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
RNU6-1309P-201
ENST00000363305
108 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
Y_RNA.133-201
ENST00000363428
110 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
Y_RNA.241-201
ENST00000364470
117 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
SNORD113.3-201
ENST00000364630
78 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
RNU1-36P-201
ENST00000365130
165 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
Y_RNA.432-201
ENST00000384087
111 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
MIR548A2-201
ENST00000384956
97 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
MT-TN-201
ENST00000387400
73 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
MTCYBP9-201
ENST00000431021
303 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
AC092892.1-201
ENST00000496067
327 nt
TSL 5
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
RNA5SP255-201
ENST00000516370
107 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
MIR548AO-201
ENST00000579992
96 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
AP000942.4-201
ENST00000604811
241 nt
BASIC
0.91
□□□□□ -2.26
CDH13
P55290
Y_RNA.66-201
ENST00000362862
102 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
RNU6-653P-201
ENST00000363074
106 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
snoU2_19.4-201
ENST00000364329
80 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
Y_RNA.262-201
ENST00000364641
102 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
Y_RNA.634-201
ENST00000364811
113 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
Y_RNA.562-201
ENST00000384695
113 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
RNU6-381P-201
ENST00000391259
108 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
MIR1302-3-201
ENST00000408128
138 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
RNU2-70P-201
ENST00000410718
179 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
RNU6-938P-201
ENST00000411285
103 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
SNRPGP8-201
ENST00000454064
226 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
RNU6-1045P-201
ENST00000516321
107 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
AP003484.1-201
ENST00000530974
250 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
AC023827.1-201
ENST00000569247
97 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
AC092071.1-201
ENST00000597260
549 nt
TSL 5
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
AL442067.1-201
ENST00000613261
223 nt
BASIC
0.9
□□□□□ -2.27
CDH13
P55290
AP003174.1-201
ENST00000306533
376 nt
TSL 2
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
MIR377-201
ENST00000362145
69 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
Y_RNA.162-201
ENST00000363683
102 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
Y_RNA.168-201
ENST00000363740
102 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
RNU4-17P-201
ENST00000365598
141 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
Y_RNA.410-201
ENST00000383992
113 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
MT-TT-201
ENST00000387460
66 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
AL606845.1-201
ENST00000404881
255 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
MTND2P23-201
ENST00000422990
651 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
RNU7-73P-201
ENST00000458743
63 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
U7.7-201
ENST00000459276
60 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
RPL39P28-201
ENST00000465655
155 nt
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
AC111194.2-201
ENST00000511222
455 nt
TSL 5
BASIC
0.89
□□□□□ -2.27
CDH13
P55290
Y_RNA.4-201
ENST00000362333
112 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
RNU6-103P-201
ENST00000363686
107 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
RNU6-654P-201
ENST00000364373
107 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
Y_RNA.494-201
ENST00000384432
111 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
AC073127.1-201
ENST00000447336
333 nt
TSL 3
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
RNU7-67P-201
ENST00000459003
62 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
AC137770.1-201
ENST00000504620
530 nt
TSL 3
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
SCARNA15.1-201
ENST00000516384
125 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
SNORA18.4-201
ENST00000516440
124 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
MIR4643-201
ENST00000577473
78 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
AC011921.3-201
ENST00000605540
361 nt
BASIC
0.88
□□□□□ -2.27
CDH13
P55290
MT-ATP8-201
ENST00000361851
207 nt
APPRIS P1
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
Y_RNA.277-201
ENST00000364754
102 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
Y_RNA.416-201
ENST00000384014
113 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
SNORA27-201
ENST00000384323
126 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
RNU2-38P-201
ENST00000410856
79 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
RPS3AP1-201
ENST00000413190
320 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
RNU6-1110P-201
ENST00000516462
101 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
RNU7-53P-201
ENST00000516705
60 nt
BASIC
0.87
□□□□□ -2.27
CDH13
P55290
RNU6-453P-201
ENST00000516819
85 nt
BASIC
0.87
□□□□□ -2.27
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