Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Pinc.1-201ENST00000616452 154 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AL365265.1-201ENST00000621045 234 ntBASIC0.95□□□□□ -2.26
HMGCS2P54868 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 RNU6-653P-201ENST00000363074 106 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 SNORD38C-201ENST00000384381 69 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 Y_RNA.486-201ENST00000384398 107 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 Y_RNA.539-201ENST00000384635 107 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 Y_RNA.556-201ENST00000384677 113 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 SNORD58.1-201ENST00000391313 66 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 RNU4-57P-201ENST00000515980 135 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 Y_RNA.680-201ENST00000516441 93 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 AC007751.1-201ENST00000529260 376 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
HMGCS2P54868 Y_RNA.416-201ENST00000384014 113 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU6-574P-201ENST00000384265 107 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 MIR520C-201ENST00000385005 87 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 MIR15B-201ENST00000385045 98 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 MT-TT-201ENST00000387460 66 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU6-910P-201ENST00000390844 107 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 Y_RNA.587-201ENST00000391210 103 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 Y_RNA.666-201ENST00000516187 112 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU7-25P-201ENST00000516544 62 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU7-43P-201ENST00000516554 64 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU6-1007P-201ENST00000516586 107 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNU6-453P-201ENST00000516819 85 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
HMGCS2P54868 RNY1P4-201ENST00000384595 115 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 Y_RNA.547-201ENST00000384654 119 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 MIR802-201ENST00000390235 94 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 U8.17-201ENST00000391292 132 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGCS2P54868 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 SNORD79.1-201ENST00000516069 84 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 Y_RNA.679-201ENST00000516416 91 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 RNU7-181P-201ENST00000517234 74 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 U4.1-201ENST00000620349 87 ntBASIC0.92□□□□□ -2.26
HMGCS2P54868 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGCS2P54868 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HMGCS2P54868 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HMGCS2P54868 Y_RNA.54-201ENST00000362766 105 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 Y_RNA.193-201ENST00000363979 102 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 Y_RNA.292-201ENST00000364904 97 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 MIR548A2-201ENST00000384956 97 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 MIR1185-1-201ENST00000408598 86 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 MIR1302-7-201ENST00000408841 72 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGCS2P54868 SNRPGP8-201ENST00000454064 226 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC023449.1-201ENST00000454464 154 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGCS2P54868 SNORA31.4-201ENST00000516049 129 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC062037.2-201ENST00000610137 73 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AL442067.1-201ENST00000613261 223 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 AC015726.2-201ENST00000620112 122 ntBASIC0.91□□□□□ -2.26
HMGCS2P54868 Y_RNA.20-201ENST00000362479 113 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 RNA5SP264-201ENST00000363115 107 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 SNORA25.3-201ENST00000363205 127 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 Y_RNA.242-201ENST00000364473 110 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 RNY4P28-201ENST00000365281 93 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 RNU6-484P-201ENST00000384016 107 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 Y_RNA.477-201ENST00000384352 108 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR570-201ENST00000384917 97 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 SNORA75.2-201ENST00000391138 150 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 SNORA75.3-201ENST00000391231 150 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 RNU6-381P-201ENST00000391259 108 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR1302-3-201ENST00000408128 138 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR548O-201ENST00000408583 114 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR548H3-201ENST00000408771 118 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 RNU2-13P-201ENST00000515909 113 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR3128-201ENST00000581957 66 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 AC008133.2-201ENST00000624540 351 ntBASIC0.9□□□□□ -2.27
HMGCS2P54868 SNORD27-201ENST00000363981 72 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 Y_RNA.350-201ENST00000365409 98 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 Y_RNA.452-201ENST00000384202 108 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 SNORD61-201ENST00000384252 73 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 Y_RNA.494-201ENST00000384432 111 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 MIR518F-201ENST00000384973 87 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 MIR616-201ENST00000385293 97 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 RNU6-938P-201ENST00000411285 103 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.89□□□□□ -2.27
HMGCS2P54868 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGCS2P54868 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGCS2P54868 RNU6-561P-201ENST00000516222 102 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 RNY3P16-201ENST00000516338 101 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 MIR4662B-201ENST00000579498 81 ntBASIC0.89□□□□□ -2.27
HMGCS2P54868 AL162730.1-201ENST00000605734 292 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms