Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR548AE2-201ENST00000583456 67 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 MIR6717-201ENST00000622747 73 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 MIR6841-201ENST00000637129 72 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EPHA4P54764 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
EPHA4P54764 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
EPHA4P54764 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 RNU6-112P-201ENST00000363599 104 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 Y_RNA.537-201ENST00000384626 109 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 RNA5SP501-201ENST00000410990 112 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 AC105272.1-201ENST00000438604 198 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 RN7SL633P-201ENST00000488974 297 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 RN7SKP12-201ENST00000516275 143 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 AC096720.1-201ENST00000604441 183 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 AL590808.1-201ENST00000618696 141 ntBASIC2.81□□□□□ -1.96
EPHA4P54764 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
EPHA4P54764 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
EPHA4P54764 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
EPHA4P54764 AC096949.1-201ENST00000412047 152 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 AC004941.2-201ENST00000427009 228 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 RNU2-13P-201ENST00000515909 113 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 RNU6-1018P-201ENST00000516577 106 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 GTF3AP2-201ENST00000557014 266 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 MIR548AR-201ENST00000582191 57 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 MIR4658-201ENST00000584344 65 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 AC062037.1-201ENST00000605302 128 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 AL020996.3-201ENST00000606617 222 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EPHA4P54764 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
EPHA4P54764 AC131280.1-202ENST00000624067 4211 ntBASIC2.8□□□□□ -1.96
EPHA4P54764 RNU6-616P-201ENST00000384353 107 ntBASIC2.79□□□□□ -1.96
EPHA4P54764 Y_RNA.500-201ENST00000384466 111 ntBASIC2.79□□□□□ -1.96
EPHA4P54764 MIR605-201ENST00000385078 83 ntBASIC2.79□□□□□ -1.96
EPHA4P54764 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
EPHA4P54764 RNA5SP356-201ENST00000515972 94 ntBASIC2.79□□□□□ -1.96
EPHA4P54764 MIR6852-201ENST00000621699 66 ntBASIC2.79□□□□□ -1.96
EPHA4P54764 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
EPHA4P54764 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
EPHA4P54764 MIR424-201ENST00000362227 98 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 RNU6-170P-201ENST00000362832 104 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 Y_RNA.470-201ENST00000384307 117 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 RNU6-296P-201ENST00000384608 107 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 SNORA26.6-201ENST00000391256 115 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 MRPL35P3-201ENST00000421557 364 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 RPL23AP6-201ENST00000446637 472 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 snoU13.16-201ENST00000459350 104 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 RNU7-61P-201ENST00000515897 61 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 RNU6-1258P-201ENST00000516911 111 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 MIR4513-201ENST00000581077 86 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 FAM106DP-201ENST00000586416 501 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 AL512310.12-203ENST00000640543 90 ntBASIC2.78□□□□□ -1.96
EPHA4P54764 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
EPHA4P54764 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
EPHA4P54764 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.78□□□□□ -1.97
EPHA4P54764 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.78□□□□□ -1.97
EPHA4P54764 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
EPHA4P54764 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
EPHA4P54764 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
EPHA4P54764 SNORA1.1-201ENST00000364671 133 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 Y_RNA.354-201ENST00000365448 111 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 Y_RNA.377-201ENST00000365644 108 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 MIR526A1-201ENST00000384897 85 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 SNORD28B-201ENST00000390993 75 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 Y_RNA.659-201ENST00000515994 113 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
EPHA4P54764 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.77□□□□□ -1.97
EPHA4P54764 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
EPHA4P54764 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
EPHA4P54764 RNU6-679P-201ENST00000391003 106 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.76□□□□□ -1.97
EPHA4P54764 UBE2DNL-203ENST00000474922 222 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 RNU6-795P-201ENST00000516323 103 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 AP003327.1-201ENST00000529684 127 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
EPHA4P54764 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
EPHA4P54764 RNA5SP173-201ENST00000364857 136 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 SNORA32-201ENST00000384072 121 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 RNA5SP184-201ENST00000411071 108 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 RNU7-43P-201ENST00000516554 64 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 RNU6-521P-201ENST00000516663 105 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 SNORA74.3-201ENST00000517108 154 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 MIR3162-201ENST00000581818 82 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 AC012531.4-201ENST00000616509 177 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.75□□□□□ -1.97
EPHA4P54764 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.75□□□□□ -1.97
EPHA4P54764 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
EPHA4P54764 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
EPHA4P54764 Y_RNA.290-201ENST00000364879 114 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 RNU6-1201P-201ENST00000384227 107 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 MIR9-1-201ENST00000385198 89 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 RNU6-913P-201ENST00000390913 95 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 RNU6-644P-201ENST00000391155 98 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
EPHA4P54764 RNU6-1190P-201ENST00000410811 104 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms