Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
PMS2P54278 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.58□□□□□ -2.16
PMS2P54278 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
PMS2P54278 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PMS2P54278 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PMS2P54278 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
PMS2P54278 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
PMS2P54278 Y_RNA.521-201ENST00000384560 114 ntBASIC1.57□□□□□ -2.16
PMS2P54278 MIR499A-201ENST00000384903 122 ntBASIC1.57□□□□□ -2.16
PMS2P54278 MIR513A1-201ENST00000385138 129 ntBASIC1.57□□□□□ -2.16
PMS2P54278 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
PMS2P54278 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.57□□□□□ -2.16
PMS2P54278 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.57□□□□□ -2.16
PMS2P54278 MIR6844-201ENST00000637122 62 ntBASIC1.57□□□□□ -2.16
PMS2P54278 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
PMS2P54278 Y_RNA.118-201ENST00000363300 101 ntBASIC1.56□□□□□ -2.16
PMS2P54278 RNU6-151P-201ENST00000364158 107 ntBASIC1.56□□□□□ -2.16
PMS2P54278 Y_RNA.215-201ENST00000364204 112 ntBASIC1.56□□□□□ -2.16
PMS2P54278 SNORA25.7-201ENST00000364375 127 ntBASIC1.56□□□□□ -2.16
PMS2P54278 MIR518F-201ENST00000384973 87 ntBASIC1.56□□□□□ -2.16
PMS2P54278 MIR802-201ENST00000390235 94 ntBASIC1.56□□□□□ -2.16
PMS2P54278 SNORA75.5-201ENST00000391291 81 ntBASIC1.56□□□□□ -2.16
PMS2P54278 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
PMS2P54278 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.56□□□□□ -2.16
PMS2P54278 AC015922.2-201ENST00000435593 184 ntBASIC1.56□□□□□ -2.16
PMS2P54278 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
PMS2P54278 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
PMS2P54278 RNU6-693P-201ENST00000516134 107 ntBASIC1.56□□□□□ -2.16
PMS2P54278 MIR3133-201ENST00000583157 78 ntBASIC1.56□□□□□ -2.16
PMS2P54278 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
PMS2P54278 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
PMS2P54278 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.56□□□□□ -2.16
PMS2P54278 MIR3658-201ENST00000636291 56 ntBASIC1.56□□□□□ -2.16
PMS2P54278 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PMS2P54278 Y_RNA.251-201ENST00000364551 99 ntBASIC1.55□□□□□ -2.16
PMS2P54278 RNU6-818P-201ENST00000364837 108 ntBASIC1.55□□□□□ -2.16
PMS2P54278 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
PMS2P54278 SNORD38C-201ENST00000384381 69 ntBASIC1.55□□□□□ -2.16
PMS2P54278 Y_RNA.547-201ENST00000384654 119 ntBASIC1.55□□□□□ -2.16
PMS2P54278 MIR452-201ENST00000385020 85 ntBASIC1.55□□□□□ -2.16
PMS2P54278 MIR624-201ENST00000385217 97 ntBASIC1.55□□□□□ -2.16
PMS2P54278 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.55□□□□□ -2.16
PMS2P54278 RNU7-197P-201ENST00000458836 62 ntBASIC1.55□□□□□ -2.16
PMS2P54278 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.55□□□□□ -2.16
PMS2P54278 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
PMS2P54278 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.55□□□□□ -2.16
PMS2P54278 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PMS2P54278 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
PMS2P54278 RNU6-1082P-201ENST00000364574 107 ntBASIC1.54□□□□□ -2.16
PMS2P54278 RNA5SP259-201ENST00000365541 109 ntBASIC1.54□□□□□ -2.16
PMS2P54278 SNORA1-201ENST00000384107 130 ntBASIC1.54□□□□□ -2.16
PMS2P54278 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
PMS2P54278 MIR548O-201ENST00000408583 114 ntBASIC1.54□□□□□ -2.16
PMS2P54278 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
PMS2P54278 RNU4-57P-201ENST00000515980 135 ntBASIC1.54□□□□□ -2.16
PMS2P54278 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
PMS2P54278 MIR548X2-201ENST00000579776 100 ntBASIC1.54□□□□□ -2.16
PMS2P54278 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
PMS2P54278 AC134878.1-201ENST00000619901 243 ntBASIC1.54□□□□□ -2.16
PMS2P54278 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PMS2P54278 SNORD115-28-201ENST00000363931 81 ntBASIC1.53□□□□□ -2.16
PMS2P54278 RNU4-11P-201ENST00000365287 132 ntBASIC1.53□□□□□ -2.16
PMS2P54278 Y_RNA.410-201ENST00000383992 113 ntBASIC1.53□□□□□ -2.16
PMS2P54278 MIR569-201ENST00000385228 96 ntBASIC1.53□□□□□ -2.16
PMS2P54278 MIR653-201ENST00000385279 96 ntBASIC1.53□□□□□ -2.16
PMS2P54278 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
PMS2P54278 AF228730.3-201ENST00000436691 102 ntBASIC1.53□□□□□ -2.16
PMS2P54278 AC087499.4-201ENST00000448505 178 ntBASIC1.53□□□□□ -2.16
PMS2P54278 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
PMS2P54278 AC093850.1-201ENST00000454121 251 ntBASIC1.53□□□□□ -2.16
PMS2P54278 RNU6-346P-201ENST00000516288 111 ntBASIC1.53□□□□□ -2.16
PMS2P54278 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
PMS2P54278 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.53□□□□□ -2.16
PMS2P54278 AC112693.2-201ENST00000556538 232 ntBASIC1.53□□□□□ -2.16
PMS2P54278 MIR3937-201ENST00000580135 106 ntBASIC1.53□□□□□ -2.16
PMS2P54278 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PMS2P54278 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
PMS2P54278 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
PMS2P54278 RNU6-774P-201ENST00000363238 107 ntBASIC1.52□□□□□ -2.17
PMS2P54278 Y_RNA.488-201ENST00000384403 102 ntBASIC1.52□□□□□ -2.17
PMS2P54278 MIR136-201ENST00000385207 82 ntBASIC1.52□□□□□ -2.17
PMS2P54278 MIR613-201ENST00000385248 95 ntBASIC1.52□□□□□ -2.17
PMS2P54278 SNORD77.3-201ENST00000391113 65 ntBASIC1.52□□□□□ -2.17
PMS2P54278 RNU6-588P-201ENST00000410281 105 ntBASIC1.52□□□□□ -2.17
PMS2P54278 RNA5SP127-201ENST00000411051 133 ntBASIC1.52□□□□□ -2.17
PMS2P54278 SNX2P2-201ENST00000424553 323 ntBASIC1.52□□□□□ -2.17
PMS2P54278 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
PMS2P54278 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
PMS2P54278 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
PMS2P54278 AL121890.5-201ENST00000620848 304 ntBASIC1.52□□□□□ -2.17
PMS2P54278 Y_RNA.37-201ENST00000362606 108 ntBASIC1.51□□□□□ -2.17
PMS2P54278 SNORA2.2-201ENST00000365473 135 ntBASIC1.51□□□□□ -2.17
PMS2P54278 RNU6-187P-201ENST00000384139 106 ntBASIC1.51□□□□□ -2.17
PMS2P54278 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
PMS2P54278 RNU6-938P-201ENST00000411285 103 ntBASIC1.51□□□□□ -2.17
PMS2P54278 AC092991.1-201ENST00000477176 376 ntBASIC1.51□□□□□ -2.17
PMS2P54278 RNU6-1270P-201ENST00000517128 108 ntBASIC1.51□□□□□ -2.17
PMS2P54278 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
PMS2P54278 SUMO2P16-201ENST00000519475 264 ntBASIC1.51□□□□□ -2.17
PMS2P54278 MIR4778-201ENST00000577635 80 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms