Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC021443.1-201ENST00000604478 211 ntBASIC2.31□□□□□ -2.04
PMS1P54277 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.31□□□□□ -2.04
PMS1P54277 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
PMS1P54277 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PMS1P54277 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PMS1P54277 MIR526A1-201ENST00000384897 85 ntBASIC2.3□□□□□ -2.04
PMS1P54277 MIR548A1-201ENST00000385041 97 ntBASIC2.3□□□□□ -2.04
PMS1P54277 RNU6-998P-201ENST00000515894 101 ntBASIC2.3□□□□□ -2.04
PMS1P54277 Y_RNA.709-201ENST00000516952 92 ntBASIC2.3□□□□□ -2.04
PMS1P54277 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
PMS1P54277 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PMS1P54277 AP000648.3-201ENST00000623539 4507 ntBASIC2.29□□□□□ -2.04
PMS1P54277 MIR449A-201ENST00000362113 91 ntBASIC2.29□□□□□ -2.04
PMS1P54277 Y_RNA.370-201ENST00000365589 108 ntBASIC2.29□□□□□ -2.04
PMS1P54277 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
PMS1P54277 Y_RNA.494-201ENST00000384432 111 ntBASIC2.29□□□□□ -2.04
PMS1P54277 RNY4P18-201ENST00000391107 89 ntBASIC2.29□□□□□ -2.04
PMS1P54277 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.29□□□□□ -2.04
PMS1P54277 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.29□□□□□ -2.04
PMS1P54277 MIR6852-201ENST00000621699 66 ntBASIC2.29□□□□□ -2.04
PMS1P54277 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
PMS1P54277 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.29□□□□□ -2.04
PMS1P54277 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PMS1P54277 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
PMS1P54277 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PMS1P54277 RNU6-1123P-201ENST00000362347 106 ntBASIC2.28□□□□□ -2.04
PMS1P54277 RNU6-880P-201ENST00000384526 107 ntBASIC2.28□□□□□ -2.04
PMS1P54277 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
PMS1P54277 SNORD123-201ENST00000459473 70 ntBASIC2.28□□□□□ -2.04
PMS1P54277 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
PMS1P54277 COX6CP6-201ENST00000490840 228 ntBASIC2.28□□□□□ -2.04
PMS1P54277 RNU6-589P-201ENST00000516485 107 ntBASIC2.28□□□□□ -2.04
PMS1P54277 RNY4P20-201ENST00000516678 93 ntBASIC2.28□□□□□ -2.04
PMS1P54277 FAM106DP-201ENST00000586416 501 ntBASIC2.28□□□□□ -2.04
PMS1P54277 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PMS1P54277 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PMS1P54277 RNU6-457P-201ENST00000363999 107 ntBASIC2.27□□□□□ -2.05
PMS1P54277 RNU4-16P-201ENST00000364737 141 ntBASIC2.27□□□□□ -2.05
PMS1P54277 RNU6-203P-201ENST00000384038 104 ntBASIC2.27□□□□□ -2.05
PMS1P54277 SNORA70.7-201ENST00000384159 133 ntBASIC2.27□□□□□ -2.05
PMS1P54277 MIR570-201ENST00000384917 97 ntBASIC2.27□□□□□ -2.05
PMS1P54277 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
PMS1P54277 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
PMS1P54277 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
PMS1P54277 SNORD53-201ENST00000579969 78 ntBASIC2.27□□□□□ -2.05
PMS1P54277 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
PMS1P54277 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PMS1P54277 Y_RNA.35-201ENST00000362601 101 ntBASIC2.26□□□□□ -2.05
PMS1P54277 SNORA63.4-201ENST00000362763 126 ntBASIC2.26□□□□□ -2.05
PMS1P54277 RNU7-67P-201ENST00000459003 62 ntBASIC2.26□□□□□ -2.05
PMS1P54277 RNU2-11P-201ENST00000459191 187 ntBASIC2.26□□□□□ -2.05
PMS1P54277 RNU7-164P-201ENST00000459221 62 ntBASIC2.26□□□□□ -2.05
PMS1P54277 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
PMS1P54277 MIR4305-201ENST00000583252 102 ntBASIC2.26□□□□□ -2.05
PMS1P54277 HSPE1P19-201ENST00000603327 295 ntBASIC2.26□□□□□ -2.05
PMS1P54277 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
PMS1P54277 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
PMS1P54277 RNU6-414P-201ENST00000363705 104 ntBASIC2.25□□□□□ -2.05
PMS1P54277 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
PMS1P54277 SNORA22-201ENST00000383907 134 ntBASIC2.25□□□□□ -2.05
PMS1P54277 MIR759-201ENST00000390224 91 ntBASIC2.25□□□□□ -2.05
PMS1P54277 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
PMS1P54277 SUMO2P16-201ENST00000519475 264 ntBASIC2.25□□□□□ -2.05
PMS1P54277 DEFB122-202ENST00000569013 197 ntBASIC2.25□□□□□ -2.05
PMS1P54277 MIR548AR-201ENST00000582191 57 ntBASIC2.25□□□□□ -2.05
PMS1P54277 Y_RNA.783-201ENST00000613546 102 ntBASIC2.25□□□□□ -2.05
PMS1P54277 Y_RNA.213-201ENST00000364178 111 ntBASIC2.24□□□□□ -2.05
PMS1P54277 Y_RNA.298-201ENST00000364960 107 ntBASIC2.24□□□□□ -2.05
PMS1P54277 RNU6-1067P-201ENST00000384752 107 ntBASIC2.24□□□□□ -2.05
PMS1P54277 SNORD28B-201ENST00000390993 75 ntBASIC2.24□□□□□ -2.05
PMS1P54277 SNORA3.2-201ENST00000408221 125 ntBASIC2.24□□□□□ -2.05
PMS1P54277 Z98742.3-201ENST00000418637 326 ntBASIC2.24□□□□□ -2.05
PMS1P54277 PDCD5P2-201ENST00000507570 312 ntBASIC2.24□□□□□ -2.05
PMS1P54277 RNU7-53P-201ENST00000516705 60 ntBASIC2.24□□□□□ -2.05
PMS1P54277 RNU6-958P-201ENST00000516995 106 ntBASIC2.24□□□□□ -2.05
PMS1P54277 MIR5089-201ENST00000580047 84 ntBASIC2.24□□□□□ -2.05
PMS1P54277 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
PMS1P54277 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.24□□□□□ -2.05
PMS1P54277 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PMS1P54277 Y_RNA.198-201ENST00000364013 98 ntBASIC2.23□□□□□ -2.05
PMS1P54277 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
PMS1P54277 AC004965.1-201ENST00000413033 213 ntBASIC2.23□□□□□ -2.05
PMS1P54277 AC063976.4-201ENST00000421971 163 ntBASIC2.23□□□□□ -2.05
PMS1P54277 RPS29P29-201ENST00000456396 171 ntBASIC2.23□□□□□ -2.05
PMS1P54277 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
PMS1P54277 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
PMS1P54277 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
PMS1P54277 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
PMS1P54277 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
PMS1P54277 AL359851.1-201ENST00000569460 4997 ntBASIC2.23□□□□□ -2.05
PMS1P54277 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
PMS1P54277 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PMS1P54277 RNU6-153P-201ENST00000364422 104 ntBASIC2.22□□□□□ -2.05
PMS1P54277 RPL23AP6-201ENST00000446637 472 ntBASIC2.22□□□□□ -2.05
PMS1P54277 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.22□□□□□ -2.05
PMS1P54277 RNU7-123P-201ENST00000515911 60 ntBASIC2.22□□□□□ -2.05
PMS1P54277 SNORA74.3-201ENST00000517108 154 ntBASIC2.22□□□□□ -2.05
PMS1P54277 AC007012.1-201ENST00000567192 175 ntBASIC2.22□□□□□ -2.05
PMS1P54277 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
PMS1P54277 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms