Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-800P-201ENST00000384473 103 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 Y_RNA.596-201ENST00000410462 109 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 RNU6-322P-201ENST00000516010 103 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 MIR3064-201ENST00000581130 66 ntBASIC3.78□□□□□ -1.8
NUBP1P53384 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUBP1P53384 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NUBP1P53384 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
NUBP1P53384 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUBP1P53384 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUBP1P53384 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUBP1P53384 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 RNA5SP432-201ENST00000362480 116 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 RNU6-466P-201ENST00000391224 103 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 AC067747.1-201ENST00000608026 250 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.77□□□□□ -1.81
NUBP1P53384 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NUBP1P53384 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUBP1P53384 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NUBP1P53384 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NUBP1P53384 RNU6-296P-201ENST00000384608 107 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 MIR1283-2-201ENST00000408621 87 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 snoU13.2-201ENST00000459201 104 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 AC025518.1-201ENST00000479856 347 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 AL137849.1-201ENST00000604767 169 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 U6.111-201ENST00000636093 83 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 AL161722.3-201ENST00000605789 2983 ntBASIC3.76□□□□□ -1.81
NUBP1P53384 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUBP1P53384 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUBP1P53384 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
NUBP1P53384 SNORD36A-201ENST00000362874 73 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 MIR520H-201ENST00000385126 88 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 MIR154-201ENST00000385243 84 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NUBP1P53384 AC074348.1-201ENST00000426503 132 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 RNU7-26P-201ENST00000458980 63 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 AC006023.1-201ENST00000603944 259 ntBASIC3.75□□□□□ -1.81
NUBP1P53384 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUBP1P53384 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NUBP1P53384 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
NUBP1P53384 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NUBP1P53384 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 SNORD9-201ENST00000362566 104 ntBASIC3.74□□□□□ -1.81
NUBP1P53384 Y_RNA.283-201ENST00000364798 112 ntBASIC3.74□□□□□ -1.81
NUBP1P53384 MIR5004-201ENST00000579078 107 ntBASIC3.74□□□□□ -1.81
NUBP1P53384 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
NUBP1P53384 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUBP1P53384 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.73□□□□□ -1.81
NUBP1P53384 RNU1-138P-201ENST00000384093 164 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 RNU1-148P-201ENST00000384472 162 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 MIR513A2-201ENST00000385249 127 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 RPS26P15-201ENST00000488067 348 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.73□□□□□ -1.81
NUBP1P53384 AC100770.1-201ENST00000532310 322 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 AC121758.2-201ENST00000553271 193 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 YWHAEP2-201ENST00000580066 112 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 MIR3945-201ENST00000581853 98 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 YWHAEP3-201ENST00000582767 121 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 SNORA4-201ENST00000584302 138 ntBASIC3.73□□□□□ -1.81
NUBP1P53384 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUBP1P53384 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUBP1P53384 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUBP1P53384 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NUBP1P53384 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUBP1P53384 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NUBP1P53384 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUBP1P53384 RNU6-1123P-201ENST00000362347 106 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 SNORA80A-201ENST00000363922 136 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 RNU6-540P-201ENST00000384622 101 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 MIR516A2-201ENST00000384888 90 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 MIR516A1-201ENST00000385033 90 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 AC093423.1-201ENST00000440817 142 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 IGLV3-26-201ENST00000520756 302 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 MIR6715A-201ENST00000615929 79 ntBASIC3.72□□□□□ -1.81
NUBP1P53384 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUBP1P53384 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUBP1P53384 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
NUBP1P53384 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUBP1P53384 Y_RNA.12-201ENST00000362393 112 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 RNU6-132P-201ENST00000383863 107 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 RNU6-471P-201ENST00000383944 106 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 MIR588-201ENST00000384900 83 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 MIR518A2-201ENST00000384966 87 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC092427.1-202ENST00000430569 476 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC105272.1-201ENST00000438604 198 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC245517.4-201ENST00000448601 281 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC009474.2-201ENST00000451383 136 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC005908.1-201ENST00000468701 347 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
NUBP1P53384 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUBP1P53384 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUBP1P53384 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms